RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 OXER1Q8TDS5 423 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 TMEM260Q9NX78 707 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 PCDHA4Q9UN74 947 aa20.65■□□□□ 0.9
TRAPPC4-203ENST00000447216 GCOM1H8Y6P7 765 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 MEIS2O14770 477 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 POLR2MP0CAP2 368 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 CALML3P27482 149 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 MRPL12P52815 198 aaKnown RBP20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 RPS6P62753 249 aaKnown RBP20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 LACTBP83111 547 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 CAP1Q01518 475 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 RNF207Q6ZRF8 634 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 BLIDQ8IZY5 108 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 JMYQ8N9B5 988 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 CD99L2Q8TCZ2 262 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 PURBQ96QR8 312 aaKnown RBP20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 CYP39A1Q9NYL5 469 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 BIN2Q9UBW5 565 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 ZNF236Q9UL36 1845 aa20.64■□□□□ 0.89
TRAPPC4-203ENST00000447216 FCER1AP12319 257 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 GNA11P29992 359 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 KRT2P35908 639 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 PSMC4P43686 418 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 HSD17B4P51659 736 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 NR5A1Q13285 461 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 PKP1Q13835 747 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 NOM1Q5C9Z4 860 aaKnown RBP20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 JAKMIP3Q5VZ66 844 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 FCHSD1Q86WN1 690 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 DIS3L2Q8IYB7 885 aaKnown RBP20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 FAM177A1Q8N128 213 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 DAGLBQ8NCG7 672 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 RGS22Q8NE09 1264 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 SYTL5Q8TDW5 730 aaPredicted RBP20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 PGBD1Q96JS3 809 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 COL20A1Q9P218 1284 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 IVNS1ABPQ9Y6Y0 642 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 MYH15Q9Y2K3 1946 aa20.63■□□□□ 0.89
TRAPPC4-203ENST00000447216 BTBD18B2RXH4 712 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 STX6O43752 255 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 PGK2P07205 417 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 PTPREP23469 700 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 GHRHRQ02643 423 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 KCTD2Q14681 263 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 FOXD4L5Q5VV16 416 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 MCTP1Q6DN14 999 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 REXO1Q8N1G1 1221 aaKnown RBP20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 BICD2Q8TD16 824 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 ZNF296Q8WUU4 475 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 FOXD4L4Q8WXT5 416 aaPredicted RBP20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 PCDHA6Q9UN73 950 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 MTMR6Q9Y217 621 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 PCDHA8Q9Y5H6 950 aa20.62■□□□□ 0.89
TRAPPC4-203ENST00000447216 PFASO15067 1338 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 KIF28PB7ZC32 967 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 M0R2N6 131 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 PIK3CDO00329 1044 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 TNPO2O14787 897 aaKnown RBP20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 FKTNO75072 461 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 ADORA2AP29274 412 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 CLK2P49760 499 aaKnown RBP20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 FCGRTP55899 365 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 CNTN2Q02246 1040 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 SAFBQ15424 915 aaKnown RBP eCLIP20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 GALNT17Q6IS24 598 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 GLT8D2Q9H1C3 349 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 BRMS1Q9HCU9 246 aa20.61■□□□□ 0.89
TRAPPC4-203ENST00000447216 FAM205CA6NFA0 338 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 SLC15A5A6NIM6 579 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 POTEB2H3BUK9 544 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 DDIT3P35638 169 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 GRB14Q14449 540 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 KIF22Q14807 665 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 FERMT3Q86UX7 667 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 TAAR1Q96RJ0 339 aa20.6■□□□□ 0.89
TRAPPC4-203ENST00000447216 STRNO43815 780 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 COBLO75128 1261 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 GNL2Q13823 731 aaKnown RBP20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 EARS2Q5JPH6 523 aaKnown RBP20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 MORN1Q5T089 497 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 ABRAQ8N0Z2 381 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 SAMD3Q8N6K7 520 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 TNFRSF25Q93038 417 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 ANO3Q9BYT9 981 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 KIAA1217Q5T5P2 1943 aa20.59■□□□□ 0.89
TRAPPC4-203ENST00000447216 DNAJC25-GNG10A0A024R161 153 aa20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 FOXN1O15353 648 aa20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 HSPA1AP0DMV8 641 aaKnown RBP20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 HSPA1BP0DMV9 641 aaKnown RBP20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 UBXN2AP68543 259 aa20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 FAM133AQ8N9E0 248 aa20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 FGD4Q96M96 766 aa20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 FOXP1Q9H334 677 aaPredicted RBP20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 MAP3K20Q9NYL2 800 aaKnown RBP20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 DDX49Q9Y6V7 483 aaKnown RBP20.58■□□□□ 0.89
TRAPPC4-203ENST00000447216 LRRC37A2A6NM11 1700 aa20.58■□□□□ 0.88
TRAPPC4-203ENST00000447216 ASTN1O14525 1302 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 TCHHQ07283 1943 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms