RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 SCLYQ96I15 445 aa28.8■■■□□ 2.2
PMS1-214ENST00000446877 PURBQ96QR8 312 aaKnown RBP28.8■■■□□ 2.2
PMS1-214ENST00000446877 WDR11Q9BZH6 1224 aa28.8■■■□□ 2.2
PMS1-214ENST00000446877 INCENPQ9NQS7 918 aa28.8■■■□□ 2.2
PMS1-214ENST00000446877 GPHNQ9NQX3 736 aaPredicted RBP28.8■■■□□ 2.2
PMS1-214ENST00000446877 PFKMP08237 780 aa28.79■■■□□ 2.2
PMS1-214ENST00000446877 ATP2A2P16615 1042 aaKnown RBP28.79■■■□□ 2.2
PMS1-214ENST00000446877 CPT1AP50416 773 aa28.79■■■□□ 2.2
PMS1-214ENST00000446877 UHRF1Q96T88 793 aaPredicted RBP28.79■■■□□ 2.2
PMS1-214ENST00000446877 BRDTQ58F21 947 aaPredicted RBP28.78■■■□□ 2.2
PMS1-214ENST00000446877 RANBP17Q9H2T7 1088 aaKnown RBP28.78■■■□□ 2.2
PMS1-214ENST00000446877 TRMT13Q9NUP7 481 aaKnown RBP28.78■■■□□ 2.2
PMS1-214ENST00000446877 CHD7Q9P2D1 2997 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 TNKSO95271 1327 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 LOC102724159A0A0B4J2E5 919 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 MYL3P08590 195 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 CYP2C9P11712 490 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 SLC16A2P36021 539 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 PWP2Q15269 919 aaKnown RBP28.77■■■□□ 2.2
PMS1-214ENST00000446877 RASGRP2Q7LDG7 609 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 MICALL1Q8N3F8 863 aa28.77■■■□□ 2.2
PMS1-214ENST00000446877 PTPDC1A2A3K4 754 aa28.76■■■□□ 2.19
PMS1-214ENST00000446877 MYOGP15173 224 aa28.76■■■□□ 2.19
PMS1-214ENST00000446877 ALDH5A1P51649 535 aaPredicted RBP28.76■■■□□ 2.19
PMS1-214ENST00000446877 SYDE2Q5VT97 1194 aa28.76■■■□□ 2.19
PMS1-214ENST00000446877 OTUD7AQ8TE49 926 aaPredicted RBP28.76■■■□□ 2.19
PMS1-214ENST00000446877 MPHOSPH6Q99547 160 aaKnown RBP28.76■■■□□ 2.19
PMS1-214ENST00000446877 MTG1Q9BT17 334 aaPredicted RBP28.76■■■□□ 2.19
PMS1-214ENST00000446877 TOMM22Q9NS69 142 aa28.76■■■□□ 2.19
PMS1-214ENST00000446877 ANAPC4Q9UJX5 808 aa28.76■■■□□ 2.19
PMS1-214ENST00000446877 ACTN1P12814 892 aa28.75■■■□□ 2.19
PMS1-214ENST00000446877 PURAQ00577 322 aaKnown RBP28.75■■■□□ 2.19
PMS1-214ENST00000446877 FAM47CQ5HY64 1035 aa28.75■■■□□ 2.19
PMS1-214ENST00000446877 TMEM67Q5HYA8 995 aa28.75■■■□□ 2.19
PMS1-214ENST00000446877 TTBK2Q6IQ55 1244 aa28.75■■■□□ 2.19
PMS1-214ENST00000446877 DEFB128Q7Z7B8 93 aa28.75■■■□□ 2.19
PMS1-214ENST00000446877 OR6J1Q8NGC5 347 aa28.75■■■□□ 2.19
PMS1-214ENST00000446877 PNMA2Q9UL42 364 aa28.75■■■□□ 2.19
PMS1-214ENST00000446877 NFIBO00712 420 aa28.74■■■□□ 2.19
PMS1-214ENST00000446877 ORC4O43929 436 aa28.74■■■□□ 2.19
PMS1-214ENST00000446877 MX1P20591 662 aa28.74■■■□□ 2.19
PMS1-214ENST00000446877 NOVP48745 357 aa28.74■■■□□ 2.19
PMS1-214ENST00000446877 BTNL9Q6UXG8 535 aa28.74■■■□□ 2.19
PMS1-214ENST00000446877 GPCPD1Q9NPB8 672 aa28.74■■■□□ 2.19
PMS1-214ENST00000446877 RAD50Q92878 1312 aa28.73■■■□□ 2.19
PMS1-214ENST00000446877 FOXP2O15409 715 aa28.73■■■□□ 2.19
PMS1-214ENST00000446877 TOP1P11387 765 aaKnown RBP28.73■■■□□ 2.19
PMS1-214ENST00000446877 CALML3P27482 149 aa28.73■■■□□ 2.19
PMS1-214ENST00000446877 PDE4DQ08499 809 aa28.73■■■□□ 2.19
PMS1-214ENST00000446877 TTLL4Q14679 1199 aa28.73■■■□□ 2.19
PMS1-214ENST00000446877 AAK1Q2M2I8 961 aa28.73■■■□□ 2.19
PMS1-214ENST00000446877 RETREG2Q8NC44 543 aa28.73■■■□□ 2.19
PMS1-214ENST00000446877 ZBTB47Q9UFB7 747 aaPredicted RBP28.73■■■□□ 2.19
PMS1-214ENST00000446877 RBM47A0AV96 593 aaKnown RBP28.72■■■□□ 2.19
PMS1-214ENST00000446877 KPNA6O60684 536 aa28.72■■■□□ 2.19
PMS1-214ENST00000446877 SKIV2LQ15477 1246 aaKnown RBP28.72■■■□□ 2.19
PMS1-214ENST00000446877 RRP12Q5JTH9 1297 aaKnown RBP28.72■■■□□ 2.19
PMS1-214ENST00000446877 VWCEQ96DN2 955 aa28.72■■■□□ 2.19
PMS1-214ENST00000446877 FRMPD2Q68DX3 1309 aaPredicted RBP28.71■■■□□ 2.19
PMS1-214ENST00000446877 GTPBP6O43824 516 aaPredicted RBP28.71■■■□□ 2.19
PMS1-214ENST00000446877 RFC2P35250 354 aa28.71■■■□□ 2.19
PMS1-214ENST00000446877 PPP2R5BQ15173 497 aa28.71■■■□□ 2.19
PMS1-214ENST00000446877 NBPF20Q3BBV1 942 aa28.71■■■□□ 2.19
PMS1-214ENST00000446877 VPS53Q5VIR6 699 aa28.71■■■□□ 2.19
PMS1-214ENST00000446877 RNF207Q6ZRF8 634 aa28.71■■■□□ 2.19
PMS1-214ENST00000446877 TMEM47Q9BQJ4 181 aa28.71■■■□□ 2.19
PMS1-214ENST00000446877 B4DLN1 442 aa28.7■■■□□ 2.18
PMS1-214ENST00000446877 NKRFO15226 690 aaKnown RBP eCLIP28.7■■■□□ 2.18
PMS1-214ENST00000446877 MRPL12P52815 198 aaKnown RBP28.7■■■□□ 2.18
PMS1-214ENST00000446877 ALX1Q15699 326 aa28.7■■■□□ 2.18
PMS1-214ENST00000446877 BDP1A6H8Y1 2624 aa28.7■■■□□ 2.18
PMS1-214ENST00000446877 CA3P07451 260 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 FGRP09769 529 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 NFRKBQ6P4R8 1299 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 SLC30A10Q6XR72 485 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 SCFD2Q8WU76 684 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 EVI5LQ96CN4 794 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 FTOQ9C0B1 505 aaKnown RBP eCLIP28.69■■■□□ 2.18
PMS1-214ENST00000446877 NOD1Q9Y239 953 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 PCDHB15Q9Y5E8 787 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 NCOR1O75376 2440 aa28.69■■■□□ 2.18
PMS1-214ENST00000446877 PHOSPHO2Q8TCD6 241 aa28.68■■■□□ 2.18
PMS1-214ENST00000446877 CLEC4DQ8WXI8 215 aa28.68■■■□□ 2.18
PMS1-214ENST00000446877 SLC9A7Q96T83 725 aa28.68■■■□□ 2.18
PMS1-214ENST00000446877 HELLSQ9NRZ9 838 aa28.68■■■□□ 2.18
PMS1-214ENST00000446877 TCP11L1Q9NUJ3 509 aa28.68■■■□□ 2.18
PMS1-214ENST00000446877 KIF28PB7ZC32 967 aa28.67■■■□□ 2.18
PMS1-214ENST00000446877 PITPNM1O00562 1244 aa28.67■■■□□ 2.18
PMS1-214ENST00000446877 PTPN11Q06124 597 aaPredicted RBP28.67■■■□□ 2.18
PMS1-214ENST00000446877 BFSP2Q13515 415 aa28.67■■■□□ 2.18
PMS1-214ENST00000446877 A6NJR5 290 aa28.66■■■□□ 2.18
PMS1-214ENST00000446877 FGAP02671 866 aa28.66■■■□□ 2.18
PMS1-214ENST00000446877 IQCF3P0C7M6 154 aa28.66■■■□□ 2.18
PMS1-214ENST00000446877 TXNP10599 105 aaKnown RBP28.66■■■□□ 2.18
PMS1-214ENST00000446877 BMP1P13497 986 aa28.66■■■□□ 2.18
PMS1-214ENST00000446877 RPS6P62753 249 aaKnown RBP28.66■■■□□ 2.18
PMS1-214ENST00000446877 DNERQ8NFT8 737 aa28.66■■■□□ 2.18
PMS1-214ENST00000446877 CERS4Q9HA82 394 aa28.66■■■□□ 2.18
PMS1-214ENST00000446877 XIRP2A4UGR9 3374 aa28.66■■■□□ 2.18
PMS1-214ENST00000446877 RFXAPO00287 272 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms