RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 MMP19Q99542 508 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 A1CFQ9NQ94 594 aaKnown RBP19.95■□□□□ 0.78
SGCE-206ENST00000445866 WBP1LQ9NX94 342 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 IVNS1ABPQ9Y6Y0 642 aa19.95■□□□□ 0.78
SGCE-206ENST00000445866 PIK3CDO00329 1044 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 STRNO43815 780 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 DDIT3P35638 169 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 RPS6P62753 249 aaKnown RBP19.94■□□□□ 0.78
SGCE-206ENST00000445866 NR5A1Q13285 461 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 PKP1Q13835 747 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 REXO1Q8N1G1 1221 aaKnown RBP19.94■□□□□ 0.78
SGCE-206ENST00000445866 DAGLBQ8NCG7 672 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 RASGRP4Q8TDF6 673 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 TMEM260Q9NX78 707 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 MAP3K20Q9NYL2 800 aaKnown RBP19.94■□□□□ 0.78
SGCE-206ENST00000445866 CYP39A1Q9NYL5 469 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 PCDHA6Q9UN73 950 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 PCDHA8Q9Y5H6 950 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 HSD17B4P51659 736 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 GPR142Q7Z601 462 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 FERMT3Q86UX7 667 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 TEX2Q8IWB9 1127 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 SYTL5Q8TDW5 730 aaPredicted RBP19.94■□□□□ 0.78
SGCE-206ENST00000445866 MAF1Q9H063 256 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 FOXP1Q9H334 677 aaPredicted RBP19.94■□□□□ 0.78
SGCE-206ENST00000445866 LOC285556D6RIA3 1793 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 CEP350Q5VT06 3117 aa19.94■□□□□ 0.78
SGCE-206ENST00000445866 GPR25O00155 361 aa19.93■□□□□ 0.78
SGCE-206ENST00000445866 ZSCAN22P10073 491 aaPredicted RBP19.93■□□□□ 0.78
SGCE-206ENST00000445866 NUCB2P80303 420 aa19.93■□□□□ 0.78
SGCE-206ENST00000445866 KIF22Q14807 665 aa19.93■□□□□ 0.78
SGCE-206ENST00000445866 MCTP2Q6DN12 878 aa19.93■□□□□ 0.78
SGCE-206ENST00000445866 BAZ2BQ9UIF8 2168 aaKnown RBP19.92■□□□□ 0.78
SGCE-206ENST00000445866 SPDYE3A6NKU9 549 aa19.92■□□□□ 0.78
SGCE-206ENST00000445866 POTEB2H3BUK9 544 aa19.92■□□□□ 0.78
SGCE-206ENST00000445866 FOSP01100 380 aaPredicted RBP19.92■□□□□ 0.78
SGCE-206ENST00000445866 PTPREP23469 700 aa19.92■□□□□ 0.78
SGCE-206ENST00000445866 PSMC4P43686 418 aa19.92■□□□□ 0.78
SGCE-206ENST00000445866 LACTBP83111 547 aaPredicted RBP19.92■□□□□ 0.78
SGCE-206ENST00000445866 TSKSQ9UJT2 592 aa19.92■□□□□ 0.78
SGCE-206ENST00000445866 CIZ1Q9ULV3 898 aaPredicted RBP19.92■□□□□ 0.78
SGCE-206ENST00000445866 PFASO15067 1338 aa19.92■□□□□ 0.78
SGCE-206ENST00000445866 CCDC194A0A1B0GVG4 234 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 M0R2N6 131 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 PGK2P07205 417 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 U2AF2P26368 475 aaKnown RBP eCLIP19.91■□□□□ 0.784e-7■■□□□ 11.5
SGCE-206ENST00000445866 CLK2P49760 499 aaKnown RBP19.91■□□□□ 0.78
SGCE-206ENST00000445866 GHRHRQ02643 423 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 SLC30A10Q6XR72 485 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.91■□□□□ 0.78
SGCE-206ENST00000445866 ABRAQ8N0Z2 381 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 PGBD1Q96JS3 809 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 PURBQ96QR8 312 aaKnown RBP19.91■□□□□ 0.78
SGCE-206ENST00000445866 TAAR1Q96RJ0 339 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 CHMP5Q9NZZ3 219 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 KIF28PB7ZC32 967 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 TNPO2O14787 897 aaKnown RBP19.91■□□□□ 0.78
SGCE-206ENST00000445866 BRD1O95696 1058 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 FCGRTP55899 365 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 PIK3AP1Q6ZUJ8 805 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 KRT25Q7Z3Z0 450 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 NOSTRINQ8IVI9 506 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 COL20A1Q9P218 1284 aa19.91■□□□□ 0.78
SGCE-206ENST00000445866 PCNTO95613 3336 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 SLC15A5A6NIM6 579 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 FKTNO75072 461 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 ADORA2AP29274 412 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 CNTN2Q02246 1040 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 AP3B2Q13367 1082 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 NOM1Q5C9Z4 860 aaKnown RBP19.9■□□□□ 0.78
SGCE-206ENST00000445866 DPP9Q86TI2 863 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 TNFRSF25Q93038 417 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 RMDN3Q96TC7 470 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 ZSCAN16Q9H4T2 348 aaPredicted RBP19.9■□□□□ 0.78
SGCE-206ENST00000445866 ZDHHC9Q9Y397 364 aa19.9■□□□□ 0.78
SGCE-206ENST00000445866 NONOQ15233 471 aaKnown RBP eCLIP19.89■□□□□ 0.77
SGCE-206ENST00000445866 EARS2Q5JPH6 523 aaKnown RBP19.89■□□□□ 0.77
SGCE-206ENST00000445866 TRIM47Q96LD4 638 aa19.89■□□□□ 0.77
SGCE-206ENST00000445866 ARHGAP39Q9C0H5 1083 aa19.89■□□□□ 0.77
SGCE-206ENST00000445866 PTPRFP10586 1907 aa19.88■□□□□ 0.77
SGCE-206ENST00000445866 CTGFP29279 349 aa19.88■□□□□ 0.77
SGCE-206ENST00000445866 GRB14Q14449 540 aa19.88■□□□□ 0.77
SGCE-206ENST00000445866 ARHGEF16Q5VV41 709 aa19.88■□□□□ 0.77
SGCE-206ENST00000445866 ZNF296Q8WUU4 475 aaPredicted RBP19.88■□□□□ 0.77
SGCE-206ENST00000445866 ANO3Q9BYT9 981 aa19.88■□□□□ 0.77
SGCE-206ENST00000445866 EHMT1Q9H9B1 1298 aa19.88■□□□□ 0.77
SGCE-206ENST00000445866 DNAJC25-GNG10A0A024R161 153 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 COBLO75128 1261 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 F13A1P00488 732 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 RESTQ13127 1097 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 BRAPQ7Z569 592 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 JMYQ8N9B5 988 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 FAM133AQ8N9E0 248 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 CD99L2Q8TCZ2 262 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 NSUN6Q8TEA1 469 aaKnown RBP19.87■□□□□ 0.77
SGCE-206ENST00000445866 TBCKQ8TEA7 893 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 NUDT12Q9BQG2 462 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 ADD3Q9UEY8 706 aaKnown RBP19.87■□□□□ 0.77
SGCE-206ENST00000445866 FAM205CA6NFA0 338 aa19.87■□□□□ 0.77
SGCE-206ENST00000445866 ATP2B1P20020 1258 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms