RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 OPLAHO14841 1288 aa14.24□□□□□ -0.13
USP1-203ENST00000442679 CFBP00751 764 aa14.24□□□□□ -0.13
USP1-203ENST00000442679 MAP3K21Q5TCX8 1036 aa14.24□□□□□ -0.13
USP1-203ENST00000442679 MAMDC4Q6UXC1 1216 aa14.24□□□□□ -0.13
USP1-203ENST00000442679 MSL3Q8N5Y2 521 aaKnown RBP14.24□□□□□ -0.13
USP1-203ENST00000442679 FGD4Q96M96 766 aa14.24□□□□□ -0.13
USP1-203ENST00000442679 TBC1D32Q96NH3 1257 aa14.24□□□□□ -0.13
USP1-203ENST00000442679 SLKQ9H2G2 1235 aaPredicted RBP14.24□□□□□ -0.13
USP1-203ENST00000442679 HMX1Q9NP08 348 aaPredicted RBP14.24□□□□□ -0.13
USP1-203ENST00000442679 ADD3Q9UEY8 706 aaKnown RBP14.24□□□□□ -0.13
USP1-203ENST00000442679 SYNGAP1Q96PV0 1343 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 ASB14A6NK59 587 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 CPLX1O14810 134 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 PRPF3O43395 683 aaKnown RBP14.23□□□□□ -0.13
USP1-203ENST00000442679 PFKFB2O60825 505 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 CAPN15O75808 1086 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 IFNAR1P17181 557 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 AKAP17AQ02040 695 aaKnown RBP14.23□□□□□ -0.13
USP1-203ENST00000442679 RABEP1Q15276 862 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 NTRK3Q16288 839 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 PRAMEF19Q5SWL8 479 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 HEATR3Q7Z4Q2 680 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 SYTL5Q8TDW5 730 aaPredicted RBP14.23□□□□□ -0.13
USP1-203ENST00000442679 GPKOWQ92917 476 aaPredicted RBP eCLIP14.23□□□□□ -0.13
USP1-203ENST00000442679 PHKBQ93100 1093 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
USP1-203ENST00000442679 CENPFP49454 3210 aa14.23□□□□□ -0.13
USP1-203ENST00000442679 GCOM1H8Y6P7 765 aaPredicted RBP14.22□□□□□ -0.13
USP1-203ENST00000442679 PPFIA3O75145 1194 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 SNAI1O95863 264 aaPredicted RBP14.22□□□□□ -0.13
USP1-203ENST00000442679 POLR2MP0CAP2 368 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 CNGA1P29973 690 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 CCND3P30281 292 aaPredicted RBP14.22□□□□□ -0.13
USP1-203ENST00000442679 HSD17B4P51659 736 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 SOX10P56693 466 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 SCRN1Q12765 414 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 CPLX2Q6PUV4 134 aaKnown RBP14.22□□□□□ -0.13
USP1-203ENST00000442679 SAMD3Q8N6K7 520 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 TRPV1Q8NER1 839 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 SLC26A6Q9BXS9 759 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.22□□□□□ -0.13
USP1-203ENST00000442679 MAP3K20Q9NYL2 800 aaKnown RBP14.22□□□□□ -0.13
USP1-203ENST00000442679 CNPY2Q9Y2B0 182 aa14.22□□□□□ -0.13
USP1-203ENST00000442679 ASTN1O14525 1302 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 GJB1P08034 283 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 CYBAP13498 195 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 HOXA13P31271 388 aaPredicted RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 ALDH5A1P51649 535 aaPredicted RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 GHRHRQ02643 423 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 SSRP1Q08945 709 aaKnown RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 ME3Q16798 604 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 PFKFB3Q16875 520 aaPredicted RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 WWC2Q6AWC2 1192 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 ARMCX2Q7L311 632 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 NECAB1Q8N987 351 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 DNERQ8NFT8 737 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 DEFB118Q96PH6 123 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 TAAR1Q96RJ0 339 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 PSTPIP2Q9H939 334 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 PAK6Q9NQU5 681 aaPredicted RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 COL20A1Q9P218 1284 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 NRBP1Q9UHY1 535 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 LIMCH1Q9UPQ0 1083 aa14.21□□□□□ -0.13
USP1-203ENST00000442679 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.13
USP1-203ENST00000442679 LOC102724159A0A0B4J2E5 919 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 B4DLN1 442 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 hCG_1984214I3L0E3 225 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 CDKL5O76039 1030 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 LARGE1O95461 756 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 SCG2P13521 617 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 MRPL12P52815 198 aaKnown RBP14.2□□□□□ -0.14
USP1-203ENST00000442679 NAPAP54920 295 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 ACVR2BQ13705 512 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 PWP2Q15269 919 aaKnown RBP14.2□□□□□ -0.14
USP1-203ENST00000442679 PKN1Q16512 942 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 TRIM22Q8IYM9 498 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 ZNF713Q8N859 430 aaPredicted RBP14.2□□□□□ -0.14
USP1-203ENST00000442679 NSUN6Q8TEA1 469 aaKnown RBP14.2□□□□□ -0.14
USP1-203ENST00000442679 CUL5Q93034 780 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 RMDN3Q96TC7 470 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 MPHOSPH6Q99547 160 aaKnown RBP14.2□□□□□ -0.14
USP1-203ENST00000442679 BARHL2Q9NY43 387 aa14.2□□□□□ -0.14
USP1-203ENST00000442679 ZNFX1Q9P2E3 1918 aaKnown RBP14.19□□□□□ -0.14
USP1-203ENST00000442679 SMCHD1A6NHR9 2005 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 STXBP3O00186 592 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 SEPT4O43236 478 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 ST18O60284 1047 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 SGPL1O95470 568 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 TFRCP02786 760 aaKnown RBP14.19□□□□□ -0.14
USP1-203ENST00000442679 ZNF865P0CJ78 1059 aaPredicted RBP14.19□□□□□ -0.14
USP1-203ENST00000442679 EN2P19622 333 aaPredicted RBP14.19□□□□□ -0.14
USP1-203ENST00000442679 PDE4DQ08499 809 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 ARHGEF16Q5VV41 709 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 TYW1BQ6NUM6 668 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 PPP1R18Q6NYC8 613 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 USP17L6PQ6QN14 398 aa14.19□□□□□ -0.14
USP1-203ENST00000442679 FCHSD1Q86WN1 690 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms