RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 PPP4R4Q6NUP7 873 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 ABCF3Q9NUQ8 709 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 SUCLA2Q9P2R7 463 aaPredicted RBP17.05■□□□□ 0.32
CDH23-207ENST00000442677 INPP5FQ9Y2H2 1132 aa17.05■□□□□ 0.32
CDH23-207ENST00000442677 H7C1D1 291 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 CPP00450 1065 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 MAP3K7CLP57077 242 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 DYNLT1P63172 113 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 SMYD3Q9H7B4 428 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 FRMPD2Q68DX3 1309 aaPredicted RBP17.04■□□□□ 0.32
CDH23-207ENST00000442677 CD109Q6YHK3 1445 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
CDH23-207ENST00000442677 SKOR1P84550 965 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 CCDC127Q96BQ5 260 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 NT5C3AQ9H0P0 336 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 CLCN6P51797 869 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 ZNF711Q9Y462 761 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 NR1D1P20393 614 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 RAPGEF5Q92565 580 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 FAM167BQ9BTA0 163 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 A6NJR5 290 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 SGO2Q562F6 1265 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 CNOT6LQ96LI5 555 aaKnown RBP17.04■□□□□ 0.32
CDH23-207ENST00000442677 TFCP2L1Q9NZI6 479 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 PLS3P13797 630 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 DHX9Q08211 1270 aaKnown RBP17.04■□□□□ 0.32
CDH23-207ENST00000442677 SPATA1Q5VX52 437 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 NOP53Q9NZM5 478 aaKnown RBP17.04■□□□□ 0.32
CDH23-207ENST00000442677 ZNF532Q9HCE3 1301 aa17.04■□□□□ 0.32
CDH23-207ENST00000442677 ATG16L1Q676U5 607 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 FAM186BQ8IYM0 893 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 FBXL13Q8NEE6 735 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 ELAC2Q9BQ52 826 aaKnown RBP17.03■□□□□ 0.32
CDH23-207ENST00000442677 GJA3Q9Y6H8 435 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 PFDN6O15212 129 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 FTCDO95954 541 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 HIBADHP31937 336 aaKnown RBP17.03■□□□□ 0.32
CDH23-207ENST00000442677 SESTD1Q86VW0 696 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 CDC26Q8NHZ8 85 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 FLOT2Q14254 428 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 TRIM42Q8IWZ5 723 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 SPATA17Q96L03 361 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 DNAJC17Q9NVM6 304 aaKnown RBP17.03■□□□□ 0.32
CDH23-207ENST00000442677 UFL1O94874 794 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 ACTN1P12814 892 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 ARHGDIAP52565 204 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 ADAM9Q13443 819 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 A0A087WWV3 80 aa17.03■□□□□ 0.32
CDH23-207ENST00000442677 SOWAHDA6NJG2 315 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 MT-ND3P03897 115 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 OCA2Q04671 838 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 NSMFQ6X4W1 530 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 DISC1Q9NRI5 854 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 WARS2Q9UGM6 360 aaKnown RBP17.02■□□□□ 0.32
CDH23-207ENST00000442677 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.32
CDH23-207ENST00000442677 ARHGEF9O43307 516 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 ATP6V1E1P36543 226 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
CDH23-207ENST00000442677 MAP3K5Q99683 1374 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 ATP8B1O43520 1251 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 SPAG7O75391 227 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 MRPS25P82663 173 aaKnown RBP17.02■□□□□ 0.32
CDH23-207ENST00000442677 STRIP2Q9ULQ0 834 aa17.02■□□□□ 0.32
CDH23-207ENST00000442677 SYCE1LA8MT33 242 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 MAPK13O15264 365 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 EXOC3L4Q17RC7 722 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 PDZD4Q76G19 769 aaPredicted RBP17.02■□□□□ 0.31
CDH23-207ENST00000442677 ACRBPQ8NEB7 543 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 TGFBRAP1Q8WUH2 860 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 PPIP5K1Q6PFW1 1433 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.31
CDH23-207ENST00000442677 TNNC2P02585 160 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 ZFXP17010 805 aaPredicted RBP17.02■□□□□ 0.31
CDH23-207ENST00000442677 CDC25BP30305 580 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.31
CDH23-207ENST00000442677 MYL7Q01449 175 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 SMYD4Q8IYR2 804 aaPredicted RBP17.02■□□□□ 0.31
CDH23-207ENST00000442677 RNF169Q8NCN4 708 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 DEPDC1BQ8WUY9 529 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 CSRNP1Q96S65 589 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 SERPINI1Q99574 410 aa17.02■□□□□ 0.31
CDH23-207ENST00000442677 PHLPP2Q6ZVD8 1323 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 NOSTRINQ8IVI9 506 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 SYMPKQ92797 1274 aaKnown RBP17.01■□□□□ 0.31
CDH23-207ENST00000442677 MAGEA9P43362 315 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 ACTN3Q08043 901 aaPredicted RBP17.01■□□□□ 0.31
CDH23-207ENST00000442677 EXOC4Q96A65 974 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 ZNF653Q96CK0 615 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 TESK2Q96S53 571 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 PCDHB4Q9Y5E5 795 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 EYA2O00167 538 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 CCDC85BQ15834 202 aaPredicted RBP17.01■□□□□ 0.31
CDH23-207ENST00000442677 RGS9BPQ6ZS82 235 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 TUBB6Q9BUF5 446 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 PCDHA12Q9UN75 941 aa17.01■□□□□ 0.31
CDH23-207ENST00000442677 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms