RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 PSRC1Q6PGN9 363 aaPredicted RBP13.79□□□□□ -0.2
TTC28-203ENST00000442232 CXCL17Q6UXB2 119 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 SLC30A10Q6XR72 485 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 PNMA1Q8ND90 353 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 MORC4Q8TE76 937 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 UBAC1Q9BSL1 405 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 PPP1R12CQ9BZL4 782 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 KRT23Q9C075 422 aa13.79□□□□□ -0.2
TTC28-203ENST00000442232 TMEM265A0A087WTH1 108 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 CPT1AP50416 773 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 ITGA7Q13683 1181 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 DUSP28Q4G0W2 176 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 ASPRV1Q53RT3 343 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 TAPT1Q6NXT6 567 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 FAM126BQ8IXS8 530 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 GUCD1Q96NT3 240 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 ZSCAN10Q96SZ4 725 aaPredicted RBP13.78□□□□□ -0.2
TTC28-203ENST00000442232 WDR11Q9BZH6 1224 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
TTC28-203ENST00000442232 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
TTC28-203ENST00000442232 PDGFCQ9NRA1 345 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 POLR3EQ9NVU0 708 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 ASTN1O14525 1302 aa13.78□□□□□ -0.2
TTC28-203ENST00000442232 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.77□□□□□ -0.21
TTC28-203ENST00000442232 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.77□□□□□ -0.21
TTC28-203ENST00000442232 B4E1Z4 1266 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 NKRFO15226 690 aaKnown RBP eCLIP13.77□□□□□ -0.21
TTC28-203ENST00000442232 CTAGE5O15320 804 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 ABCB11O95342 1321 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 GOLGA8HP0CJ92 632 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 EPHB4P54760 987 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
TTC28-203ENST00000442232 DNERQ8NFT8 737 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 OR6J1Q8NGC5 347 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 PURBQ96QR8 312 aaKnown RBP13.77□□□□□ -0.21
TTC28-203ENST00000442232 HIPK3Q9H422 1215 aa13.77□□□□□ -0.21
TTC28-203ENST00000442232 DDX49Q9Y6V7 483 aaKnown RBP13.77□□□□□ -0.21
TTC28-203ENST00000442232 TNKSO95271 1327 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 DLL1O00548 723 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 MYL3P08590 195 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 PARP1P09874 1014 aaKnown RBP13.76□□□□□ -0.21
TTC28-203ENST00000442232 CSF2RAP15509 400 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 TRDNQ13061 729 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 CDC37Q16543 378 aaPredicted RBP13.76□□□□□ -0.21
TTC28-203ENST00000442232 IFIT1BQ5T764 474 aaKnown RBP13.76□□□□□ -0.21
TTC28-203ENST00000442232 SLC43A3Q8NBI5 491 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 SCFD2Q8WU76 684 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 RUFY2Q8WXA3 655 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 CLEC4DQ8WXI8 215 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 CDX2Q99626 313 aaPredicted RBP13.76□□□□□ -0.21
TTC28-203ENST00000442232 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.21
TTC28-203ENST00000442232 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 MAF1Q9H063 256 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 COL6A3P12111 3177 aa13.76□□□□□ -0.21
TTC28-203ENST00000442232 CD4P01730 458 aa13.75□□□□□ -0.21
TTC28-203ENST00000442232 FOSL2P15408 326 aa13.75□□□□□ -0.21
TTC28-203ENST00000442232 DNAJB2P25686 324 aa13.75□□□□□ -0.21
TTC28-203ENST00000442232 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
TTC28-203ENST00000442232 ENAHQ8N8S7 591 aaPredicted RBP13.75□□□□□ -0.21
TTC28-203ENST00000442232 RGS22Q8NE09 1264 aa13.75□□□□□ -0.21
TTC28-203ENST00000442232 IL23AQ9NPF7 189 aa13.75□□□□□ -0.21
TTC28-203ENST00000442232 SUPT16HQ9Y5B9 1047 aaKnown RBP13.75□□□□□ -0.21
TTC28-203ENST00000442232 KIAA1217Q5T5P2 1943 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 LAMA2P24043 3122 aaKnown RBP13.74□□□□□ -0.21
TTC28-203ENST00000442232 RBM47A0AV96 593 aaKnown RBP13.74□□□□□ -0.21
TTC28-203ENST00000442232 SUPT20HL2P0C7V6 817 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 CYP2C18P33260 490 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 PSMC6P62333 389 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 TTLL4Q14679 1199 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 TMEM240Q5SV17 173 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 TTC22Q5TAA0 569 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 MAFAQ8NHW3 353 aaPredicted RBP13.74□□□□□ -0.21
TTC28-203ENST00000442232 MYLIPQ8WY64 445 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 ANKS1AQ92625 1134 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 MTG1Q9BT17 334 aaPredicted RBP13.74□□□□□ -0.21
TTC28-203ENST00000442232 CPVLQ9H3G5 476 aa13.74□□□□□ -0.21
TTC28-203ENST00000442232 MRPL11Q9Y3B7 192 aaKnown RBP13.74□□□□□ -0.21
TTC28-203ENST00000442232 ERICH2A1L162 156 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 KPNA6O60684 536 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 ACRP10323 421 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
TTC28-203ENST00000442232 PTGS1P23219 599 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 PURAQ00577 322 aaKnown RBP13.73□□□□□ -0.21
TTC28-203ENST00000442232 FAM47CQ5HY64 1035 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 ZNF365Q70YC5 407 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 RALYLQ86SE5 291 aaKnown RBP13.73□□□□□ -0.21
TTC28-203ENST00000442232 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.73□□□□□ -0.21
TTC28-203ENST00000442232 RPUSD2Q8IZ73 545 aaKnown RBP13.73□□□□□ -0.21
TTC28-203ENST00000442232 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 TRPV6Q9H1D0 765 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 ALDH8A1Q9H2A2 487 aaPredicted RBP13.73□□□□□ -0.21
TTC28-203ENST00000442232 TTYH1Q9H313 450 aaPredicted RBP13.73□□□□□ -0.21
TTC28-203ENST00000442232 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 ZSWIM5Q9P217 1185 aa13.73□□□□□ -0.21
TTC28-203ENST00000442232 U3KPZ7 1027 aaPredicted RBP13.73□□□□□ -0.21
TTC28-203ENST00000442232 B4GALT4O60513 344 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms