RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 RAG1P15918 1043 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 EPHB4P54760 987 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 SEC23AQ15436 765 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 ASPRV1Q53RT3 343 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 KIAA1211Q6ZU35 1233 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 ADGRF4Q8IZF3 695 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 RUFY2Q8WXA3 655 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 VTI1AQ96AJ9 217 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 UBAC1Q9BSL1 405 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 AP5M1Q9H0R1 490 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 TBX21Q9UL17 535 aa31.65■■■□□ 2.66
MRPL28-204ENST00000441883 CDC37Q16543 378 aaPredicted RBP31.64■■■□□ 2.66
MRPL28-204ENST00000441883 FSCN1Q16658 493 aaKnown RBP31.64■■■□□ 2.66
MRPL28-204ENST00000441883 USH1GQ495M9 461 aa31.64■■■□□ 2.66
MRPL28-204ENST00000441883 CXCL17Q6UXB2 119 aa31.64■■■□□ 2.66
MRPL28-204ENST00000441883 RGS22Q8NE09 1264 aa31.64■■■□□ 2.66
MRPL28-204ENST00000441883 A0A0U1RQG5 324 aaPredicted RBP31.63■■■□□ 2.65
MRPL28-204ENST00000441883 RBM47A0AV96 593 aaKnown RBP31.63■■■□□ 2.65
MRPL28-204ENST00000441883 CYP21A2P08686 494 aa31.63■■■□□ 2.65
MRPL28-204ENST00000441883 TBC1D5Q92609 795 aa31.63■■■□□ 2.65
MRPL28-204ENST00000441883 MTMR10Q9NXD2 777 aa31.63■■■□□ 2.65
MRPL28-204ENST00000441883 SGSM2O43147 1006 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 PARP1P09874 1014 aaKnown RBP31.62■■■□□ 2.65
MRPL28-204ENST00000441883 EDNRBP24530 442 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 DUSP28Q4G0W2 176 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 MROH7Q68CQ1 1323 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 FAM126BQ8IXS8 530 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 SLC43A3Q8NBI5 491 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 JMJD4Q9H9V9 463 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 TAF6LQ9Y6J9 622 aa31.62■■■□□ 2.65
MRPL28-204ENST00000441883 GRIN2DO15399 1336 aa31.61■■■□□ 2.65
MRPL28-204ENST00000441883 IFIT1BQ5T764 474 aaKnown RBP31.61■■■□□ 2.65
MRPL28-204ENST00000441883 STAG2Q8N3U4 1231 aa31.61■■■□□ 2.65
MRPL28-204ENST00000441883 DNERQ8NFT8 737 aa31.61■■■□□ 2.65
MRPL28-204ENST00000441883 WDR11Q9BZH6 1224 aa31.61■■■□□ 2.65
MRPL28-204ENST00000441883 MYH6P13533 1939 aa31.6■■■□□ 2.65
MRPL28-204ENST00000441883 TIMP1P01033 207 aa31.6■■■□□ 2.65
MRPL28-204ENST00000441883 QRICH1Q2TAL8 776 aa31.6■■■□□ 2.65
MRPL28-204ENST00000441883 VAT1LQ9HCJ6 419 aa31.6■■■□□ 2.65
MRPL28-204ENST00000441883 U3KPZ7 1027 aaPredicted RBP31.6■■■□□ 2.65
MRPL28-204ENST00000441883 CABYRO75952 493 aa31.59■■■□□ 2.65
MRPL28-204ENST00000441883 CD4P01730 458 aa31.59■■■□□ 2.65
MRPL28-204ENST00000441883 FAM109BQ6ICB4 259 aaPredicted RBP31.59■■■□□ 2.65
MRPL28-204ENST00000441883 MAF1Q9H063 256 aa31.59■■■□□ 2.65
MRPL28-204ENST00000441883 COL6A3P12111 3177 aa31.59■■■□□ 2.65
MRPL28-204ENST00000441883 ABCB11O95342 1321 aa31.58■■■□□ 2.65
MRPL28-204ENST00000441883 FPGSQ05932 587 aa31.58■■■□□ 2.65
MRPL28-204ENST00000441883 PDE4DQ08499 809 aa31.57■■■□□ 2.64
MRPL28-204ENST00000441883 TRDNQ13061 729 aa31.57■■■□□ 2.64
MRPL28-204ENST00000441883 MAP4K1Q92918 833 aa31.57■■■□□ 2.64
MRPL28-204ENST00000441883 COL20A1Q9P218 1284 aa31.57■■■□□ 2.64
MRPL28-204ENST00000441883 ZEB2O60315 1214 aa31.56■■■□□ 2.64
MRPL28-204ENST00000441883 ITGA7Q13683 1181 aa31.56■■■□□ 2.64
MRPL28-204ENST00000441883 STOX1Q6ZVD7 989 aa31.56■■■□□ 2.64
MRPL28-204ENST00000441883 FBXO11Q86XK2 927 aa31.56■■■□□ 2.64
MRPL28-204ENST00000441883 SYTL5Q8TDW5 730 aaPredicted RBP31.56■■■□□ 2.64
MRPL28-204ENST00000441883 SENP2Q9HC62 589 aa31.56■■■□□ 2.64
MRPL28-204ENST00000441883 MAD2L2Q9UI95 211 aa31.56■■■□□ 2.64
MRPL28-204ENST00000441883 PALM3A6NDB9 673 aaPredicted RBP31.55■■■□□ 2.64
MRPL28-204ENST00000441883 KLRF2D3W0D1 207 aa31.55■■■□□ 2.64
MRPL28-204ENST00000441883 E7EWF7 191 aa31.55■■■□□ 2.64
MRPL28-204ENST00000441883 MFSD5Q6N075 450 aa31.55■■■□□ 2.64
MRPL28-204ENST00000441883 MTMR8Q96EF0 704 aa31.55■■■□□ 2.64
MRPL28-204ENST00000441883 TAAR1Q96RJ0 339 aa31.55■■■□□ 2.64
MRPL28-204ENST00000441883 DHX16O60231 1041 aaKnown RBP31.54■■■□□ 2.64
MRPL28-204ENST00000441883 PSMC6P62333 389 aa31.54■■■□□ 2.64
MRPL28-204ENST00000441883 SLC35G1Q2M3R5 365 aa31.54■■■□□ 2.64
MRPL28-204ENST00000441883 MPHOSPH6Q99547 160 aaKnown RBP31.54■■■□□ 2.64
MRPL28-204ENST00000441883 TLR3O15455 904 aaKnown RBP31.53■■■□□ 2.64
MRPL28-204ENST00000441883 C16orf59Q7L2K0 433 aa31.53■■■□□ 2.64
MRPL28-204ENST00000441883 MRPL11Q9Y3B7 192 aaKnown RBP31.53■■■□□ 2.64
MRPL28-204ENST00000441883 IFIT3O14879 490 aaKnown RBP31.52■■■□□ 2.64
MRPL28-204ENST00000441883 MCF2L2Q86YR7 1114 aa31.52■■■□□ 2.64
MRPL28-204ENST00000441883 NCOA7Q8NI08 942 aa31.52■■■□□ 2.64
MRPL28-204ENST00000441883 SCFD2Q8WU76 684 aa31.52■■■□□ 2.64
MRPL28-204ENST00000441883 STXBP5LQ9Y2K9 1186 aa31.52■■■□□ 2.64
MRPL28-204ENST00000441883 BAZ2BQ9UIF8 2168 aaKnown RBP31.51■■■□□ 2.64
MRPL28-204ENST00000441883 B4DLN1 442 aa31.51■■■□□ 2.63
MRPL28-204ENST00000441883 OPLAHO14841 1288 aa31.51■■■□□ 2.63
MRPL28-204ENST00000441883 PPP1R11O60927 126 aaPredicted RBP31.51■■■□□ 2.63
MRPL28-204ENST00000441883 MRPL12P52815 198 aaKnown RBP31.51■■■□□ 2.63
MRPL28-204ENST00000441883 SMAD3P84022 425 aaKnown RBP31.51■■■□□ 2.63
MRPL28-204ENST00000441883 CHST3Q7LGC8 479 aa31.51■■■□□ 2.63
MRPL28-204ENST00000441883 OR6J1Q8NGC5 347 aa31.51■■■□□ 2.63
MRPL28-204ENST00000441883 COPS5Q92905 334 aa31.51■■■□□ 2.63
MRPL28-204ENST00000441883 RNPC3Q96LT9 517 aaKnown RBP31.51■■■□□ 2.63
MRPL28-204ENST00000441883 SEZ6LQ9BYH1 1024 aa31.51■■■□□ 2.63
MRPL28-204ENST00000441883 PPP1R12CQ9BZL4 782 aa31.51■■■□□ 2.63
MRPL28-204ENST00000441883 NKRFO15226 690 aaKnown RBP eCLIP31.5■■■□□ 2.63
MRPL28-204ENST00000441883 ARIH2O95376 493 aa31.5■■■□□ 2.63
MRPL28-204ENST00000441883 ANTXR2P58335 489 aa31.5■■■□□ 2.63
MRPL28-204ENST00000441883 PURAQ00577 322 aaKnown RBP31.5■■■□□ 2.63
MRPL28-204ENST00000441883 GRM4Q14833 912 aa31.5■■■□□ 2.63
MRPL28-204ENST00000441883 PPP2R5BQ15173 497 aa31.5■■■□□ 2.63
MRPL28-204ENST00000441883 RALYLQ86SE5 291 aaKnown RBP31.5■■■□□ 2.63
MRPL28-204ENST00000441883 NSUN6Q8TEA1 469 aaKnown RBP31.5■■■□□ 2.63
MRPL28-204ENST00000441883 GUCD1Q96NT3 240 aa31.5■■■□□ 2.63
MRPL28-204ENST00000441883 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.5■■■□□ 2.631e-8■■■■■ 29.6
MRPL28-204ENST00000441883 AMNQ9BXJ7 453 aa31.5■■■□□ 2.63
MRPL28-204ENST00000441883 TRPV6Q9H1D0 765 aa31.5■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms