RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 DDX49Q9Y6V7 483 aaKnown RBP11.91□□□□□ -0.5
SYN3-204ENST00000441821 SCN5AQ14524 2016 aa11.91□□□□□ -0.5
SYN3-204ENST00000441821 MYH7P12883 1935 aa11.9□□□□□ -0.5
SYN3-204ENST00000441821 PIEZO1Q92508 2521 aa11.9□□□□□ -0.5
SYN3-204ENST00000441821 PLA2G6O60733 806 aa11.9□□□□□ -0.5
SYN3-204ENST00000441821 ALAS1P13196 640 aa11.9□□□□□ -0.5
SYN3-204ENST00000441821 NFRKBQ6P4R8 1299 aa11.9□□□□□ -0.5
SYN3-204ENST00000441821 GMCL1Q96IK5 515 aa11.9□□□□□ -0.5
SYN3-204ENST00000441821 FTOQ9C0B1 505 aaKnown RBP eCLIP11.9□□□□□ -0.5
SYN3-204ENST00000441821 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.5
SYN3-204ENST00000441821 TRIOO75962 3097 aa11.9□□□□□ -0.51
SYN3-204ENST00000441821 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.89□□□□□ -0.51
SYN3-204ENST00000441821 LOC102724159A0A0B4J2E5 919 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 RBM47A0AV96 593 aaKnown RBP11.89□□□□□ -0.51
SYN3-204ENST00000441821 HMMRO75330 724 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 PRDM1O75626 825 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 MYL3P08590 195 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 PTPN11Q06124 597 aaPredicted RBP11.89□□□□□ -0.51
SYN3-204ENST00000441821 BFSP2Q13515 415 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 PWP2Q15269 919 aaKnown RBP11.89□□□□□ -0.51
SYN3-204ENST00000441821 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 MUM1L1Q5H9M0 696 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 FAM178BQ8IXR5 827 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 GJD3Q8N144 294 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 NEDD1Q8NHV4 660 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 WDR11Q9BZH6 1224 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 COL4A4P53420 1690 aaPredicted RBP11.89□□□□□ -0.51
SYN3-204ENST00000441821 PLIN4Q96Q06 1357 aa11.89□□□□□ -0.51
SYN3-204ENST00000441821 USP34Q70CQ2 3546 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 KPNA6O60684 536 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 ALADP13716 330 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 SLC1A4P43007 532 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 KCNJ6P48051 423 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 IKQ13123 557 aaPredicted RBP11.88□□□□□ -0.51
SYN3-204ENST00000441821 LRRFIP1Q32MZ4 808 aaKnown RBP11.88□□□□□ -0.51
SYN3-204ENST00000441821 LEXMQ3ZCV2 418 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 BRDTQ58F21 947 aaPredicted RBP11.88□□□□□ -0.51
SYN3-204ENST00000441821 FAM47CQ5HY64 1035 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 SPRED2Q7Z698 418 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 SIRT2Q8IXJ6 389 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
SYN3-204ENST00000441821 UBE2ZQ9H832 354 aaPredicted RBP11.88□□□□□ -0.51
SYN3-204ENST00000441821 ADD3Q9UEY8 706 aaKnown RBP11.88□□□□□ -0.51
SYN3-204ENST00000441821 ISY1Q9ULR0 285 aaKnown RBP11.88□□□□□ -0.51
SYN3-204ENST00000441821 TANC1Q9C0D5 1861 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 MUC6Q6W4X9 2439 aa11.88□□□□□ -0.51
SYN3-204ENST00000441821 LCHNA4D1U4 455 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 TSPY3P0CV98 308 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 TSPY8P0CW00 308 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 GNAT2P19087 354 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 MCCP23508 829 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 TDO2P48775 406 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 MRE11P49959 708 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 WDR5P61964 334 aaKnown RBP11.87□□□□□ -0.51
SYN3-204ENST00000441821 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 NSMFQ6X4W1 530 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 OR6J1Q8NGC5 347 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.87□□□□□ -0.51
SYN3-204ENST00000441821 GDPD5Q8WTR4 605 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 OSBP2Q969R2 916 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 ZBED2Q9BTP6 218 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 KCNH6Q9H252 994 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 SUGCTQ9HAC7 445 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 EPB41L4AQ9HCS5 686 aaPredicted RBP11.87□□□□□ -0.51
SYN3-204ENST00000441821 PRR12Q9ULL5 1215 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 SCN10AQ9Y5Y9 1956 aa11.87□□□□□ -0.51
SYN3-204ENST00000441821 RAD50Q92878 1312 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 LCTP09848 1927 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 PTPRSQ13332 1948 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 A6NJR5 290 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 NKRFO15226 690 aaKnown RBP eCLIP11.86□□□□□ -0.51
SYN3-204ENST00000441821 ICAM1P05362 532 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 CENPBP07199 599 aaPredicted RBP11.86□□□□□ -0.51
SYN3-204ENST00000441821 ALDH5A1P51649 535 aaPredicted RBP11.86□□□□□ -0.51
SYN3-204ENST00000441821 SNAP25P60880 206 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 ERVK-21P61565 698 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 TFAP4Q01664 338 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 PDE4BQ07343 736 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 BAATQ14032 418 aaPredicted RBP11.86□□□□□ -0.51
SYN3-204ENST00000441821 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 CCDC155Q8N6L0 562 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 CAGE1Q8TC20 777 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 AFAP1L1Q8TED9 768 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 APPBP2Q92624 585 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 RAD9AQ99638 391 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 CCPG1Q9ULG6 757 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 NOD1Q9Y239 953 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 C5orf42Q9H799 3197 aa11.86□□□□□ -0.51
SYN3-204ENST00000441821 PATL2C9JE40 543 aaKnown RBP11.85□□□□□ -0.51
SYN3-204ENST00000441821 GPAA1O43292 621 aa11.85□□□□□ -0.51
SYN3-204ENST00000441821 GJB5O95377 273 aa11.85□□□□□ -0.51
SYN3-204ENST00000441821 PARNO95453 639 aaKnown RBP11.85□□□□□ -0.51
SYN3-204ENST00000441821 APPP05067 770 aa11.85□□□□□ -0.51
SYN3-204ENST00000441821 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
SYN3-204ENST00000441821 NHLH1Q02575 133 aa11.85□□□□□ -0.51
SYN3-204ENST00000441821 GPNMBQ14956 572 aa11.85□□□□□ -0.51
SYN3-204ENST00000441821 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms