RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 WDR5P61964 334 aaKnown RBP7.63□□□□□ -1.19
HDAC6-210ENST00000441703 PSMC6P62333 389 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 TNFAIP2Q03169 654 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 SIGLEC14Q08ET2 396 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 SEPT2Q15019 361 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 FSCN1Q16658 493 aaKnown RBP7.63□□□□□ -1.19
HDAC6-210ENST00000441703 FAM47CQ5HY64 1035 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 TTC6Q86TZ1 520 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 RPAINQ86UA6 219 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 TLK2Q86UE8 772 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 TNPO1Q92973 898 aaKnown RBP7.63□□□□□ -1.19
HDAC6-210ENST00000441703 RAD9AQ99638 391 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 EHD4Q9H223 541 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 NSUN3Q9H649 340 aaKnown RBP7.63□□□□□ -1.19
HDAC6-210ENST00000441703 SH2D4AQ9H788 454 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 ARHGEF10LQ9HCE6 1279 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 TRMT13Q9NUP7 481 aaKnown RBP7.63□□□□□ -1.19
HDAC6-210ENST00000441703 FAM13BQ9NYF5 915 aa7.63□□□□□ -1.19
HDAC6-210ENST00000441703 R3HCC1Q9Y3T6 440 aaKnown RBP7.63□□□□□ -1.19
HDAC6-210ENST00000441703 FAM186AA6NE01 2351 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 GRIN2DO15399 1336 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 UQCRHLA0A096LP55 91 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 WDR46O15213 610 aaKnown RBP7.62□□□□□ -1.19
HDAC6-210ENST00000441703 CTAGE5O15320 804 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 MBTPS2O43462 519 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 GALR2O43603 387 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-210ENST00000441703 UQCRHP07919 91 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 IQCF3P0C7M6 154 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 ZSCAN20P17040 1043 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-210ENST00000441703 MCAMP43121 646 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 SMAD4Q13485 552 aaKnown RBP7.62□□□□□ -1.19
HDAC6-210ENST00000441703 BFSP2Q13515 415 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 ST3GAL2Q16842 350 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 KLHL40Q2TBA0 621 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 FAM117BQ6P1L5 589 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 ARMCX2Q7L311 632 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 TMCO2Q7Z6W1 182 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-210ENST00000441703 ZNF467Q7Z7K2 595 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-210ENST00000441703 SPICE1Q8N0Z3 855 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 RMDN1Q96DB5 314 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 NEUROD6Q96NK8 337 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 HDAC5Q9UQL6 1122 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 NOD1Q9Y239 953 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 CTDP1Q9Y5B0 961 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-210ENST00000441703 C5orf42Q9H799 3197 aa7.62□□□□□ -1.19
HDAC6-210ENST00000441703 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 A0A1W2PRG0 241 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 GOLGA6L22H0YM25 854 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 PITPNM1O00562 1244 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 DYNC1LI2O43237 492 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 BCAR3O75815 825 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 GJB5O95377 273 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 UQCRFS1P1P0C7P4 283 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 GUCY1A2P33402 732 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 NKX3-2P78367 333 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 DEFB103AP81534 67 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 TFCP2Q12800 502 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 MKRN4PQ13434 485 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 GPM6BQ13491 265 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 COL9A2Q14055 689 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 PUM1Q14671 1186 aaKnown RBP eCLIP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 SNRNP48Q6IEG0 339 aaKnown RBP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 FRMD5Q7Z6J6 570 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 ADGRA1Q86SQ6 560 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 ANKRD35Q8N283 1001 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 CCDC155Q8N6L0 562 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 MAGEB6Q8N7X4 407 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 SAMD11Q96NU1 681 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 C17orf80Q9BSJ5 609 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 VCPKMTQ9H867 229 aa7.61□□□□□ -1.19
HDAC6-210ENST00000441703 ALG13Q9NP73 1137 aaKnown RBP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 GPHNQ9NQX3 736 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-210ENST00000441703 TANC1Q9C0D5 1861 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 CACNA1HO95180 2353 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 VWA5AO00534 786 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 RAD21O60216 631 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 POLR3DP05423 398 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-210ENST00000441703 SHMT1P34896 483 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 DYNLL1P63167 89 aaKnown RBP7.6□□□□□ -1.19
HDAC6-210ENST00000441703 LRRFIP1Q32MZ4 808 aaKnown RBP7.6□□□□□ -1.19
HDAC6-210ENST00000441703 CNKSR3Q6P9H4 555 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 ZBTB33Q86T24 672 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 CERS3Q8IU89 383 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 CCDC144CPQ8IYA2 1237 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 KCNG4Q8TDN1 519 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.6□□□□□ -1.19
HDAC6-210ENST00000441703 TEX13BQ9BXU2 312 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 POLR3EQ9NVU0 708 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 CCDC39Q9UFE4 941 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 CD207Q9UJ71 328 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 ZKSCAN5Q9Y2L8 839 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 PTPRSQ13332 1948 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 CHD8Q9HCK8 2581 aa7.6□□□□□ -1.19
HDAC6-210ENST00000441703 ASTN1O14525 1302 aa7.59□□□□□ -1.19
HDAC6-210ENST00000441703 EFCAB14O75071 495 aa7.59□□□□□ -1.19
HDAC6-210ENST00000441703 MYL3P08590 195 aa7.59□□□□□ -1.19
HDAC6-210ENST00000441703 GTF2F1P35269 517 aaKnown RBP eCLIP7.59□□□□□ -1.193e-6■■■■□ 25.9
HDAC6-210ENST00000441703 ICA1Q05084 483 aa7.59□□□□□ -1.19
HDAC6-210ENST00000441703 MTX1Q13505 466 aa7.59□□□□□ -1.19
HDAC6-210ENST00000441703 EPC2Q52LR7 807 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms