RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 ERCC5P28715 1186 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-209ENST00000440653 HOXA7P31268 230 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-209ENST00000440653 MAGEA10P43363 369 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-209ENST00000440653 EVX2Q03828 476 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 PNOCQ13519 176 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 GPATCH4Q5T3I0 446 aaKnown RBP10.35□□□□□ -0.75
HDAC6-209ENST00000440653 WWC2Q6AWC2 1192 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 PIK3AP1Q6ZUJ8 805 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 USP17L1Q7RTZ2 530 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 HEATR3Q7Z4Q2 680 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 SPC24Q8NBT2 197 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 SLC44A5Q8NCS7 719 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 AGBL3Q8NEM8 1001 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 SPATA20Q8TB22 786 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 U2AF1L4Q8WU68 220 aaKnown RBP10.35□□□□□ -0.75
HDAC6-209ENST00000440653 FBXW7Q969H0 707 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 CEP95Q96GE4 821 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 AK8Q96MA6 479 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 GSDMAQ96QA5 445 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 ZMYND12Q9H0C1 365 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 RNF208Q9H0X6 261 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 GLT8D2Q9H1C3 349 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 KCNF1Q9H3M0 494 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 CUEDC2Q9H467 287 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-209ENST00000440653 C6orf50Q9HD87 102 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 RMND1Q9NWS8 449 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 ATRNL1Q5VV63 1379 aa10.35□□□□□ -0.75
HDAC6-209ENST00000440653 SYNGAP1Q96PV0 1343 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 CDH23Q9H251 3354 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 TESPA1A2RU30 521 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-209ENST00000440653 KLRF2D3W0D1 207 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 M0R2N6 131 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 TTLL1O95922 423 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 SNHG28P0DPA3 235 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 NAPAP54920 295 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-209ENST00000440653 MORC3Q14149 939 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 NOLC1Q14978 699 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC6-209ENST00000440653 LONRF3Q496Y0 759 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 CCDC186Q7Z3E2 898 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 TEX2Q8IWB9 1127 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 C7orf61Q8IZ16 206 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 CERS5Q8N5B7 392 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 IQUBQ8NA54 791 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 CCDC112Q8NEF3 446 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 CDX2Q99626 313 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-209ENST00000440653 IDI2Q9BXS1 227 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 MTMR4Q9NYA4 1195 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 SERPINA10Q9UK55 444 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 SYNPO2Q9UMS6 1093 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 PCDHA5Q9Y5H7 936 aa10.34□□□□□ -0.75
HDAC6-209ENST00000440653 SYNRGQ9UMZ2 1314 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 KIF2AO00139 706 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 BIN1O00499 593 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 WNT10BO00744 389 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 CCP110O43303 1012 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 CTGFP29279 349 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 CRKP46108 304 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 SARSP49591 514 aaKnown RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 PTGDRQ13258 359 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 NCAPHQ15003 741 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 NONOQ15233 471 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 TAF1CQ15572 869 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 FAM109BQ6ICB4 259 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 SH3RF1Q7Z6J0 888 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 REXO1Q8N1G1 1221 aaKnown RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 STAG2Q8N3U4 1231 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 ENOX1Q8TC92 643 aaKnown RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 NAP1L4Q99733 375 aaKnown RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 KCND1Q9NSA2 647 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 SERTAD1Q9UHV2 236 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 MAN1B1Q9UKM7 699 aa10.33□□□□□ -0.76
HDAC6-209ENST00000440653 BAZ2BQ9UIF8 2168 aaKnown RBP10.33□□□□□ -0.76
HDAC6-209ENST00000440653 hCG_1642624A0A1W2PR95 340 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 VWA3AA6NCI4 1184 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 CYTH3O43739 400 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 GTPBP6O43824 516 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-209ENST00000440653 SGPL1O95470 568 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 PDHBP11177 359 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 SFPQP23246 707 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC6-209ENST00000440653 GRK4P32298 578 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 LACTBP83111 547 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-209ENST00000440653 FANCCQ00597 558 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 PICALMQ13492 652 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 EARS2Q5JPH6 523 aaKnown RBP10.32□□□□□ -0.76
HDAC6-209ENST00000440653 DNTTIP2Q5QJE6 756 aaKnown RBP10.32□□□□□ -0.76
HDAC6-209ENST00000440653 MCTP2Q6DN12 878 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 GPKOWQ92917 476 aaPredicted RBP eCLIP10.32□□□□□ -0.762e-6■■□□□ 12.7
HDAC6-209ENST00000440653 DHX58Q96C10 678 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 MXD3Q9BW11 206 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 TRIM34Q9BYJ4 488 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 UBE2OQ9C0C9 1292 aaKnown RBP10.32□□□□□ -0.76
HDAC6-209ENST00000440653 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 ZFYVE28Q9HCC9 887 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 USP40Q9NVE5 1235 aa10.32□□□□□ -0.76
HDAC6-209ENST00000440653 SSC5DA1L4H1 1573 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms