RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 POLR3EQ9NVU0 708 aa24.43■■□□□ 1.5
TRIM39-210ENST00000440271 CCPG1Q9ULG6 757 aa24.43■■□□□ 1.5
TRIM39-210ENST00000440271 LRRC37A2A6NM11 1700 aa24.43■■□□□ 1.5
TRIM39-210ENST00000440271 TNKSO95271 1327 aa24.42■■□□□ 1.5
TRIM39-210ENST00000440271 POU3F3P20264 500 aaPredicted RBP24.42■■□□□ 1.5
TRIM39-210ENST00000440271 KCNQ1P51787 676 aa24.42■■□□□ 1.5
TRIM39-210ENST00000440271 SKIV2LQ15477 1246 aaKnown RBP24.42■■□□□ 1.5
TRIM39-210ENST00000440271 IL17RBQ9NRM6 502 aa24.42■■□□□ 1.5
TRIM39-210ENST00000440271 MTCH2Q9Y6C9 303 aa24.42■■□□□ 1.5
TRIM39-210ENST00000440271 TCF20Q9UGU0 1960 aaKnown RBP24.42■■□□□ 1.5
TRIM39-210ENST00000440271 ERC2O15083 957 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 NMT2O60551 498 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 ICAM1P05362 532 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 CA3P07451 260 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 PURAQ00577 322 aaKnown RBP24.41■■□□□ 1.5
TRIM39-210ENST00000440271 RASGRP2Q7LDG7 609 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 C1QTNF1Q9BXJ1 281 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 WDR11Q9BZH6 1224 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 DCTPP1Q9H773 170 aa24.41■■□□□ 1.5
TRIM39-210ENST00000440271 REV3LO60673 3130 aa24.4■■□□□ 1.5
TRIM39-210ENST00000440271 TSPY2A6NKD2 308 aa24.4■■□□□ 1.5
TRIM39-210ENST00000440271 MYL3P08590 195 aa24.4■■□□□ 1.5
TRIM39-210ENST00000440271 BAATQ14032 418 aaPredicted RBP24.4■■□□□ 1.5
TRIM39-210ENST00000440271 MIER1Q8N108 512 aa24.4■■□□□ 1.5
TRIM39-210ENST00000440271 FAM122AQ96E09 287 aa24.4■■□□□ 1.5
TRIM39-210ENST00000440271 CERS4Q9HA82 394 aa24.4■■□□□ 1.5
TRIM39-210ENST00000440271 INCENPQ9NQS7 918 aa24.4■■□□□ 1.5
TRIM39-210ENST00000440271 ADD3Q9UEY8 706 aaKnown RBP24.4■■□□□ 1.5
TRIM39-210ENST00000440271 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.4■■□□□ 1.5
TRIM39-210ENST00000440271 GTPBP6O43824 516 aaPredicted RBP24.39■■□□□ 1.49
TRIM39-210ENST00000440271 ACTN1P12814 892 aa24.39■■□□□ 1.49
TRIM39-210ENST00000440271 CPT1AP50416 773 aa24.39■■□□□ 1.49
TRIM39-210ENST00000440271 C20orf194Q5TEA3 1177 aa24.39■■□□□ 1.49
TRIM39-210ENST00000440271 GPHNQ9NQX3 736 aaPredicted RBP24.39■■□□□ 1.49
TRIM39-210ENST00000440271 MTMR7Q9Y216 660 aa24.39■■□□□ 1.49
TRIM39-210ENST00000440271 RBM47A0AV96 593 aaKnown RBP24.38■■□□□ 1.49
TRIM39-210ENST00000440271 ALDH5A1P51649 535 aaPredicted RBP24.38■■□□□ 1.49
TRIM39-210ENST00000440271 CTDSPL2Q05D32 466 aa24.38■■□□□ 1.49
TRIM39-210ENST00000440271 PHOSPHO2Q8TCD6 241 aa24.38■■□□□ 1.49
TRIM39-210ENST00000440271 MTG1Q9BT17 334 aaPredicted RBP24.38■■□□□ 1.49
TRIM39-210ENST00000440271 RANBP17Q9H2T7 1088 aaKnown RBP24.38■■□□□ 1.49
TRIM39-210ENST00000440271 PRRC2BQ5JSZ5 2229 aaKnown RBP24.38■■□□□ 1.49
TRIM39-210ENST00000440271 LOC102724159A0A0B4J2E5 919 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 EPOPA6NHQ4 379 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 RFC2P35250 354 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 PWP2Q15269 919 aaKnown RBP24.37■■□□□ 1.49
TRIM39-210ENST00000440271 CCDC96Q2M329 555 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 NBPF20Q3BBV1 942 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 FAM47CQ5HY64 1035 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 ZMYM1Q5SVZ6 1142 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 OR6J1Q8NGC5 347 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 SLC9A7Q96T83 725 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 XIRP2A4UGR9 3374 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 TRANK1O15050 2925 aa24.37■■□□□ 1.49
TRIM39-210ENST00000440271 LCTP09848 1927 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 NFIBO00712 420 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 SLC16A2P36021 539 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 TTBK2Q6IQ55 1244 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 RETREG2Q8NC44 543 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 DCAF4Q8WV16 495 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 FSD1Q9BTV5 496 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 RCAN3Q9UKA8 241 aa24.36■■□□□ 1.49
TRIM39-210ENST00000440271 PTPDC1A2A3K4 754 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 FOXP2O15409 715 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 RANBP6O60518 1105 aaKnown RBP24.35■■□□□ 1.49
TRIM39-210ENST00000440271 IQCF3P0C7M6 154 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 NOVP48745 357 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 TAP1Q03518 808 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 KRT40Q6A162 431 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 BTNL9Q6UXG8 535 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 PPP1R13LQ8WUF5 828 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 ARNTL2Q8WYA1 636 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 COG5Q9UP83 839 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 TTC41PQ6P2S7 1318 aa24.35■■□□□ 1.49
TRIM39-210ENST00000440271 PITPNM1O00562 1244 aa24.34■■□□□ 1.49
TRIM39-210ENST00000440271 ARHGEF15O94989 841 aa24.34■■□□□ 1.49
TRIM39-210ENST00000440271 BRDTQ58F21 947 aaPredicted RBP24.34■■□□□ 1.49
TRIM39-210ENST00000440271 NFRKBQ6P4R8 1299 aa24.34■■□□□ 1.49
TRIM39-210ENST00000440271 HERC6Q8IVU3 1022 aa24.34■■□□□ 1.49
TRIM39-210ENST00000440271 FTOQ9C0B1 505 aaKnown RBP eCLIP24.34■■□□□ 1.49
TRIM39-210ENST00000440271 SCN5AQ14524 2016 aa24.34■■□□□ 1.49
TRIM39-210ENST00000440271 KIF28PB7ZC32 967 aa24.33■■□□□ 1.49
TRIM39-210ENST00000440271 KPNA6O60684 536 aa24.33■■□□□ 1.49
TRIM39-210ENST00000440271 SYDE2Q5VT97 1194 aa24.33■■□□□ 1.49
TRIM39-210ENST00000440271 PI4K2BQ8TCG2 481 aa24.33■■□□□ 1.49
TRIM39-210ENST00000440271 EPHX3Q9H6B9 360 aa24.33■■□□□ 1.49
TRIM39-210ENST00000440271 A6NJR5 290 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 NKRFO15226 690 aaKnown RBP eCLIP24.32■■□□□ 1.48
TRIM39-210ENST00000440271 TLL1O43897 1013 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 CALML3P27482 149 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 PTPN11Q06124 597 aaPredicted RBP24.32■■□□□ 1.48
TRIM39-210ENST00000440271 PPP2R5BQ15173 497 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 SLC30A10Q6XR72 485 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 CLEC4DQ8WXI8 215 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 ANAPC4Q9UJX5 808 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 RAD50Q92878 1312 aa24.32■■□□□ 1.48
TRIM39-210ENST00000440271 PDE4DQ08499 809 aa24.31■■□□□ 1.48
TRIM39-210ENST00000440271 BFSP2Q13515 415 aa24.31■■□□□ 1.48
TRIM39-210ENST00000440271 RNF207Q6ZRF8 634 aa24.31■■□□□ 1.48
TRIM39-210ENST00000440271 COPS5Q92905 334 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms