RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 MED15Q96RN5 788 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 CARD6Q9BX69 1037 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.91■□□□□ 0.14
LIMD1-202ENST00000440097 C10orf71Q711Q0 1435 aa15.91■□□□□ 0.14
LIMD1-202ENST00000440097 LAD1O00515 517 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 ZBTB5O15062 677 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 FANCGO15287 622 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 CUL4BQ13620 913 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 E2F4Q16254 413 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 GRIPAP1Q4V328 841 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 TRIM65Q6PJ69 517 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 NUP88Q99567 741 aaPredicted RBP15.9■□□□□ 0.14
LIMD1-202ENST00000440097 TSPYL1Q9H0U9 437 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 EPC1Q9H2F5 836 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 ZCCHC17Q9NP64 241 aaKnown RBP15.9■□□□□ 0.14
LIMD1-202ENST00000440097 DISC1Q9NRI5 854 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 ESYT2A0FGR8 921 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 ENTPD3O75355 529 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 TXKP42681 527 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 SH3RF1Q7Z6J0 888 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 SPATA20Q8TB22 786 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 CUL5Q93034 780 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 PSMD1Q99460 953 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 PCNTO95613 3336 aa15.9■□□□□ 0.14
LIMD1-202ENST00000440097 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 MARCH6O60337 910 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 TXLNBQ8N3L3 684 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 NYAP2Q9P242 653 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 MYH4Q9Y623 1939 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 F5H6K3 240 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 PPP1R11O60927 126 aaPredicted RBP15.89■□□□□ 0.13
LIMD1-202ENST00000440097 SASH3O75995 380 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 KCNA3P22001 575 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 MRPL12P52815 198 aaKnown RBP15.89■□□□□ 0.13
LIMD1-202ENST00000440097 KLRC3Q07444 240 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 TATDN1Q6P1N9 297 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 PDXDC2PQ6P474 469 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 SPICE1Q8N0Z3 855 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 SLC16A10Q8TF71 515 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 PSTPIP2Q9H939 334 aa15.89■□□□□ 0.13
LIMD1-202ENST00000440097 OAS2P29728 719 aaKnown RBP15.88■□□□□ 0.13
LIMD1-202ENST00000440097 SNAP25P60880 206 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 CALCRLQ16602 461 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 UBXN6Q9BZV1 441 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 SAMSN1Q9NSI8 373 aaKnown RBP15.88■□□□□ 0.13
LIMD1-202ENST00000440097 PIM2Q9P1W9 311 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 PCDHA1Q9Y5I3 950 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 SYNRGQ9UMZ2 1314 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 EFCAB8A8MWE9 144 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 CCP110O43303 1012 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
LIMD1-202ENST00000440097 TBC1D8O95759 1140 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 DHX8Q14562 1220 aaKnown RBP15.88■□□□□ 0.13
LIMD1-202ENST00000440097 SAMD1Q6SPF0 538 aaPredicted RBP15.88■□□□□ 0.13
LIMD1-202ENST00000440097 CABP7Q86V35 215 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 ENOX1Q8TC92 643 aaKnown RBP15.88■□□□□ 0.13
LIMD1-202ENST00000440097 MAPK8IP1Q9UQF2 711 aa15.88■□□□□ 0.13
LIMD1-202ENST00000440097 GTPBP6O43824 516 aaPredicted RBP15.87■□□□□ 0.13
LIMD1-202ENST00000440097 COBLO75128 1261 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 TDP2O95551 362 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 PRPHP41219 470 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 QRICH1Q2TAL8 776 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 DCAF4Q8WV16 495 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 SRRTQ9BXP5 876 aaKnown RBP15.87■□□□□ 0.13
LIMD1-202ENST00000440097 TMEM232C9JQI7 657 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 VIL1P09327 827 aaKnown RBP15.87■□□□□ 0.13
LIMD1-202ENST00000440097 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
LIMD1-202ENST00000440097 CDC37Q16543 378 aaPredicted RBP15.87■□□□□ 0.13
LIMD1-202ENST00000440097 USH1GQ495M9 461 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 MTRQ99707 1265 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 RIC8AQ9NPQ8 531 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 ZNF70Q9UC06 446 aaPredicted RBP15.87■□□□□ 0.13
LIMD1-202ENST00000440097 ZNRF3Q9ULT6 936 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 ERCC5P28715 1186 aaPredicted RBP15.87■□□□□ 0.13
LIMD1-202ENST00000440097 MUM1L1Q5H9M0 696 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 REXO1L1PQ8IX06 675 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 CTNND2Q9UQB3 1225 aa15.87■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L15C9J2P7 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L13C9JLJ4 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L11C9JVI0 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L18D6R9N7 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L22D6RA61 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L17D6RBQ6 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L19D6RCP7 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L20D6RJB6 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 ATP8B1O43520 1251 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 MYO1BO43795 1136 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 NDUFB10O96000 172 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
LIMD1-202ENST00000440097 GOLGA8FQ08AF8 430 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 GOLGA8DPQ0D2H9 430 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L24Q0WX57 530 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 TMEM266Q2M3C6 531 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 CC2D1AQ6P1N0 951 aaPredicted RBP15.86■□□□□ 0.13
LIMD1-202ENST00000440097 USP17L6PQ6QN14 398 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 MIGA2Q7L4E1 593 aa15.86■□□□□ 0.13
LIMD1-202ENST00000440097 JDP2Q8WYK2 163 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms