RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 TBX21Q9UL17 535 aa19.04■□□□□ 0.64
SNRPD3-204ENST00000439775 ARVCFO00192 962 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 PARP1P09874 1014 aaKnown RBP19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 CALML3P27482 149 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 BEX3Q00994 111 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 SHHQ15465 462 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 C9orf50Q5SZB4 431 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 MPHOSPH6Q99547 160 aaKnown RBP19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 UBA5Q9GZZ9 404 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 CPVLQ9H3G5 476 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 COL6A3P12111 3177 aa19.03■□□□□ 0.64
SNRPD3-204ENST00000439775 RBM47A0AV96 593 aaKnown RBP19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 ZEB2O60315 1214 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 EDNRBP24530 442 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 SEC23AQ15436 765 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 USH1GQ495M9 461 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 DUSP28Q4G0W2 176 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 IFIT1BQ5T764 474 aaKnown RBP19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 FAM109BQ6ICB4 259 aaPredicted RBP19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 KIAA1211Q6ZU35 1233 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 Q7L0L9 218 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 FAM126BQ8IXS8 530 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 ADGRF4Q8IZF3 695 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 VTI1AQ96AJ9 217 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 SEZ6LQ9BYH1 1024 aa19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 U3KPZ7 1027 aaPredicted RBP19.02■□□□□ 0.64
SNRPD3-204ENST00000439775 ABCB11O95342 1321 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 DYNC1LI2O43237 492 aaPredicted RBP19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 TIMP1P01033 207 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 CYP21A2P08686 494 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 FPGSQ05932 587 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 TRDNQ13061 729 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 CXCL17Q6UXB2 119 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 SLC43A3Q8NBI5 491 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 MTMR10Q9NXD2 777 aa19.01■□□□□ 0.63
SNRPD3-204ENST00000439775 SGSM2O43147 1006 aa19■□□□□ 0.63
SNRPD3-204ENST00000439775 PTGS1P23219 599 aa19■□□□□ 0.63
SNRPD3-204ENST00000439775 PTH1RQ03431 593 aa19■□□□□ 0.63
SNRPD3-204ENST00000439775 PDE4DQ08499 809 aa19■□□□□ 0.63
SNRPD3-204ENST00000439775 TMEM63BQ5T3F8 832 aa19■□□□□ 0.63
SNRPD3-204ENST00000439775 CYB5R4Q7L1T6 521 aa19■□□□□ 0.63
SNRPD3-204ENST00000439775 WDR11Q9BZH6 1224 aa19■□□□□ 0.63
SNRPD3-204ENST00000439775 B4DLN1 442 aa18.99■□□□□ 0.63
SNRPD3-204ENST00000439775 TLR3O15455 904 aaKnown RBP18.99■□□□□ 0.63
SNRPD3-204ENST00000439775 CD4P01730 458 aa18.99■□□□□ 0.63
SNRPD3-204ENST00000439775 MRPL12P52815 198 aaKnown RBP18.99■□□□□ 0.63
SNRPD3-204ENST00000439775 EPHB4P54760 987 aa18.99■□□□□ 0.63
SNRPD3-204ENST00000439775 QRICH1Q2TAL8 776 aa18.99■□□□□ 0.63
SNRPD3-204ENST00000439775 JMJD4Q9H9V9 463 aa18.99■□□□□ 0.63
SNRPD3-204ENST00000439775 NKRFO15226 690 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 SMAD3P84022 425 aaKnown RBP18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 ITGA7Q13683 1181 aa18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 MFSD5Q6N075 450 aa18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 FBXO11Q86XK2 927 aa18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 MCF2L2Q86YR7 1114 aa18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 SCFD2Q8WU76 684 aa18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 STXBP5LQ9Y2K9 1186 aa18.98■□□□□ 0.63
SNRPD3-204ENST00000439775 DHX16O60231 1041 aaKnown RBP18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 CPT1AP50416 773 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 PPP2R5BQ15173 497 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 RALYLQ86SE5 291 aaKnown RBP18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 STAG2Q8N3U4 1231 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 MAP4K1Q92918 833 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 MTMR8Q96EF0 704 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 RNPC3Q96LT9 517 aaKnown RBP18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 POLR3EQ9NVU0 708 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 MAD2L2Q9UI95 211 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 MRPL11Q9Y3B7 192 aaKnown RBP18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 GRIN2DO15399 1336 aa18.97■□□□□ 0.63
SNRPD3-204ENST00000439775 PALM3A6NDB9 673 aaPredicted RBP18.96■□□□□ 0.63
SNRPD3-204ENST00000439775 KLRF2D3W0D1 207 aa18.96■□□□□ 0.63
SNRPD3-204ENST00000439775 E7EWF7 191 aa18.96■□□□□ 0.63
SNRPD3-204ENST00000439775 OR6J1Q8NGC5 347 aa18.96■□□□□ 0.63
SNRPD3-204ENST00000439775 NCOA7Q8NI08 942 aa18.96■□□□□ 0.63
SNRPD3-204ENST00000439775 SYTL5Q8TDW5 730 aaPredicted RBP18.96■□□□□ 0.63
SNRPD3-204ENST00000439775 AMNQ9BXJ7 453 aa18.96■□□□□ 0.63
SNRPD3-204ENST00000439775 ERICH2A1L162 156 aa18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 IFIT3O14879 490 aaKnown RBP18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 PURAQ00577 322 aaKnown RBP18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 GHRHRQ02643 423 aa18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 PPIGQ13427 754 aaKnown RBP eCLIP18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 SART3Q15020 963 aaKnown RBP18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 ZNF697Q5TEC3 545 aa18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 TMEM199Q8N511 208 aa18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 NSUN6Q8TEA1 469 aaKnown RBP18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 IWS1Q96ST2 819 aa18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 COL20A1Q9P218 1284 aa18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 TAF6LQ9Y6J9 622 aa18.95■□□□□ 0.62
SNRPD3-204ENST00000439775 ZBTB5O15062 677 aa18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 PSMC6P62333 389 aa18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 TTLL4Q14679 1199 aa18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 GRM4Q14833 912 aa18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 BRDTQ58F21 947 aaPredicted RBP18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 STOX1Q6ZVD7 989 aa18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 TBC1D5Q92609 795 aa18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 VAT1LQ9HCJ6 419 aa18.94■□□□□ 0.62
SNRPD3-204ENST00000439775 A6NJR5 290 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 OPLAHO14841 1288 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 B4GALT4O60513 344 aa18.93■□□□□ 0.62
SNRPD3-204ENST00000439775 TXNP10599 105 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms