RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TSGA10IPQ3SY00 556 aa27.89■■■□□ 2.06
CPNE1-217ENST00000439669 MORC4Q8TE76 937 aa27.89■■■□□ 2.06
CPNE1-217ENST00000439669 SPC25Q9HBM1 224 aa27.89■■■□□ 2.06
CPNE1-217ENST00000439669 VTA1Q9NP79 307 aa27.89■■■□□ 2.06
CPNE1-217ENST00000439669 ZMYND8Q9ULU4 1186 aaPredicted RBP27.89■■■□□ 2.06
CPNE1-217ENST00000439669 SLC12A7Q9Y666 1083 aa27.89■■■□□ 2.06
CPNE1-217ENST00000439669 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-217ENST00000439669 CYTH3O43739 400 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 PPP1R11O60927 126 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-217ENST00000439669 C6orf222P0C671 652 aaPredicted RBP27.88■■■□□ 2.05
CPNE1-217ENST00000439669 RXRAP19793 462 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 PDE4DQ08499 809 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 RAB11FIP4Q86YS3 637 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 DNERQ8NFT8 737 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 PIBF1Q8WXW3 757 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 TBC1D5Q92609 795 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 TCEANC2Q96MN5 208 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 PHF24Q9UPV7 400 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 PCDHA1Q9Y5I3 950 aa27.88■■■□□ 2.05
CPNE1-217ENST00000439669 CALM1P0DP23 149 aa27.87■■■□□ 2.05
CPNE1-217ENST00000439669 CALM2P0DP24 149 aa27.87■■■□□ 2.05
CPNE1-217ENST00000439669 CALM3P0DP25 149 aa27.87■■■□□ 2.05
CPNE1-217ENST00000439669 DHX32Q7L7V1 743 aaKnown RBP27.87■■■□□ 2.05
CPNE1-217ENST00000439669 MAF1Q9H063 256 aa27.87■■■□□ 2.05
CPNE1-217ENST00000439669 PDGFCQ9NRA1 345 aa27.87■■■□□ 2.05
CPNE1-217ENST00000439669 MYADML2A6NDP7 307 aa27.86■■■□□ 2.05
CPNE1-217ENST00000439669 B4DLN1 442 aa27.86■■■□□ 2.05
CPNE1-217ENST00000439669 CFBP00751 764 aa27.86■■■□□ 2.05
CPNE1-217ENST00000439669 HSPA4P34932 840 aa27.86■■■□□ 2.05
CPNE1-217ENST00000439669 MRPL12P52815 198 aaKnown RBP27.86■■■□□ 2.05
CPNE1-217ENST00000439669 TRAF1Q13077 416 aa27.86■■■□□ 2.05
CPNE1-217ENST00000439669 CHRDL2Q6WN34 429 aa27.86■■■□□ 2.05
CPNE1-217ENST00000439669 SYTL5Q8TDW5 730 aaPredicted RBP27.86■■■□□ 2.05
CPNE1-217ENST00000439669 BAZ2BQ9UIF8 2168 aaKnown RBP27.86■■■□□ 2.05
CPNE1-217ENST00000439669 PNMA6FA0A0J9YX94 578 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 SYN1P17600 705 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 GNAQP50148 359 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 RTP1P59025 263 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 IQSEC1Q6DN90 963 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 TAPT1Q6NXT6 567 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 SLC39A5Q6ZMH5 540 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 SYNE3Q6ZMZ3 975 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 MICU3Q86XE3 530 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 KLHDC9Q8NEP7 349 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 LZTS2Q9BRK4 669 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 TSEN34Q9BSV6 310 aaKnown RBP27.85■■■□□ 2.05
CPNE1-217ENST00000439669 UPF3AQ9H1J1 476 aaKnown RBP27.85■■■□□ 2.05
CPNE1-217ENST00000439669 COLQQ9Y215 455 aaPredicted RBP27.85■■■□□ 2.05
CPNE1-217ENST00000439669 ATP11BQ9Y2G3 1177 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 CEP290O15078 2479 aa27.85■■■□□ 2.05
CPNE1-217ENST00000439669 SMPD1P17405 629 aa27.84■■■□□ 2.05
CPNE1-217ENST00000439669 GJA9P57773 515 aa27.84■■■□□ 2.05
CPNE1-217ENST00000439669 IRX5P78411 483 aaPredicted RBP27.84■■■□□ 2.05
CPNE1-217ENST00000439669 EXOSC10Q01780 885 aaKnown RBP27.84■■■□□ 2.05
CPNE1-217ENST00000439669 TLK2Q86UE8 772 aa27.84■■■□□ 2.05
CPNE1-217ENST00000439669 SGMS1Q86VZ5 419 aa27.84■■■□□ 2.05
CPNE1-217ENST00000439669 TAAR1Q96RJ0 339 aa27.84■■■□□ 2.05
CPNE1-217ENST00000439669 SPZ1Q9BXG8 430 aa27.84■■■□□ 2.05
CPNE1-217ENST00000439669 COL20A1Q9P218 1284 aa27.84■■■□□ 2.05
CPNE1-217ENST00000439669 A0A1W2PQ45 241 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-217ENST00000439669 A0A1W2PQY0 241 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 PLEKHA8P1O95397 391 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 HMGB1P09429 215 aaKnown RBP27.83■■■□□ 2.05
CPNE1-217ENST00000439669 EDNRBP24530 442 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 CST5P28325 142 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-217ENST00000439669 ACLYP53396 1101 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 KCNA10Q16322 511 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 KCNB2Q92953 911 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 RRP36Q96EU6 259 aaKnown RBP27.83■■■□□ 2.05
CPNE1-217ENST00000439669 JAKMIP1Q96N16 626 aaKnown RBP27.83■■■□□ 2.05
CPNE1-217ENST00000439669 AP5M1Q9H0R1 490 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 GNEQ9Y223 722 aaKnown RBP27.83■■■□□ 2.05
CPNE1-217ENST00000439669 SNX14Q9Y5W7 946 aa27.83■■■□□ 2.05
CPNE1-217ENST00000439669 MOXD2PA6NHM9 499 aa27.82■■■□□ 2.04
CPNE1-217ENST00000439669 OPLAHO14841 1288 aa27.82■■■□□ 2.04
CPNE1-217ENST00000439669 PTGS1P23219 599 aa27.82■■■□□ 2.04
CPNE1-217ENST00000439669 FGD1P98174 961 aa27.82■■■□□ 2.04
CPNE1-217ENST00000439669 TRIM60Q495X7 471 aa27.82■■■□□ 2.04
CPNE1-217ENST00000439669 GNASQ5JWF2 1037 aa27.82■■■□□ 2.04
CPNE1-217ENST00000439669 PCSK9Q8NBP7 692 aaKnown RBP27.82■■■□□ 2.04
CPNE1-217ENST00000439669 NSUN6Q8TEA1 469 aaKnown RBP27.82■■■□□ 2.04
CPNE1-217ENST00000439669 RMDN3Q96TC7 470 aa27.82■■■□□ 2.04
CPNE1-217ENST00000439669 SEC63Q9UGP8 760 aaKnown RBP27.82■■■□□ 2.04
CPNE1-217ENST00000439669 SMARCA1P28370 1054 aa27.81■■■□□ 2.04
CPNE1-217ENST00000439669 ARHGEF16Q5VV41 709 aa27.81■■■□□ 2.04
CPNE1-217ENST00000439669 CCSAPQ6IQ19 270 aaPredicted RBP27.81■■■□□ 2.04
CPNE1-217ENST00000439669 APOA5Q6Q788 366 aa27.81■■■□□ 2.04
CPNE1-217ENST00000439669 CMTR1Q8N1G2 835 aaKnown RBP27.81■■■□□ 2.04
CPNE1-217ENST00000439669 SRBD1Q8N5C6 995 aaKnown RBP27.81■■■□□ 2.04
CPNE1-217ENST00000439669 WDR11Q9BZH6 1224 aa27.81■■■□□ 2.04
CPNE1-217ENST00000439669 DYNC1LI2O43237 492 aaPredicted RBP27.8■■■□□ 2.04
CPNE1-217ENST00000439669 CPA1P15085 419 aa27.8■■■□□ 2.04
CPNE1-217ENST00000439669 HSD17B4P51659 736 aa27.8■■■□□ 2.04
CPNE1-217ENST00000439669 BEX3Q00994 111 aa27.8■■■□□ 2.04
CPNE1-217ENST00000439669 SNX17Q15036 470 aa27.8■■■□□ 2.04
CPNE1-217ENST00000439669 TMEM63BQ5T3F8 832 aa27.8■■■□□ 2.04
CPNE1-217ENST00000439669 FANCBQ8NB91 859 aa27.8■■■□□ 2.04
CPNE1-217ENST00000439669 STARD7Q9NQZ5 370 aa27.8■■■□□ 2.04
CPNE1-217ENST00000439669 ASGR1P07306 291 aa27.79■■■□□ 2.04
CPNE1-217ENST00000439669 EIF2AK2P19525 551 aaKnown RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms