RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 CHST13Q8NET6 341 aa10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 CCDC136Q96JN2 1154 aa10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 PURBQ96QR8 312 aaKnown RBP10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 PHOX2BQ99453 314 aa10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 TINF2Q9BSI4 451 aa10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 KRT23Q9C075 422 aa10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 UBA5Q9GZZ9 404 aa10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 DDX20Q9UHI6 824 aaKnown RBP10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 DIS3Q9Y2L1 958 aaKnown RBP10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 LTBP2Q14767 1821 aa10.02□□□□□ -0.81
HERPUD2-206ENST00000438224 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 NFIBO00712 420 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 EVI5O60447 810 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 ICAM1P05362 532 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 ATN1P54259 1190 aaPredicted RBP10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 MAMDC4Q6UXC1 1216 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 CHST3Q7LGC8 479 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 NECAB2Q7Z6G3 386 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 IQCA1Q86XH1 822 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 STAG2Q8N3U4 1231 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 DDX11Q96FC9 970 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 CALR3Q96L12 384 aaKnown RBP10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 TRERF1Q96PN7 1200 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 TMEM121BQ9BXQ6 578 aaPredicted RBP10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 ACAD9Q9H845 621 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 CNNM2Q9H8M5 875 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 CDHR5Q9HBB8 845 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 SLC5A4Q9NY91 659 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 CCPG1Q9ULG6 757 aa10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 CTDP1Q9Y5B0 961 aaPredicted RBP10.01□□□□□ -0.81
HERPUD2-206ENST00000438224 MYH7BA7E2Y1 1941 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 SLC27A2O14975 620 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 SEPT4O43236 478 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 IRX5P78411 483 aaPredicted RBP10□□□□□ -0.81
HERPUD2-206ENST00000438224 TMEM259Q4ZIN3 620 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 ANKRD35Q8N283 1001 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 CLEC4DQ8WXI8 215 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 UBAC1Q9BSL1 405 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 KATNBL1Q9H079 304 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 C11orf49Q9H6J7 331 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 KAT14Q9H8E8 782 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 FBXO40Q9UH90 709 aa10□□□□□ -0.81
HERPUD2-206ENST00000438224 CAPN2P17655 700 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 PTGS1P23219 599 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 NT5C2P49902 561 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 NECTIN1Q15223 517 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 LRRC26Q2I0M4 334 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 TKFCQ3LXA3 575 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 ASPRV1Q53RT3 343 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 CCDC178Q5BJE1 867 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 GPATCH4Q5T3I0 446 aaKnown RBP9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 GJC2Q5T442 439 aaPredicted RBP9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 IFIT1BQ5T764 474 aaKnown RBP9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 CREB3L3Q68CJ9 461 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 ARMCX2Q7L311 632 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 CCDC144CPQ8IYA2 1237 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 DPF3Q92784 378 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 HTATIP2Q9BUP3 242 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 NPDC1Q9NQX5 325 aaPredicted RBP9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 CYP39A1Q9NYL5 469 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 DOCK5Q9H7D0 1870 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 WDR19Q8NEZ3 1342 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 SYNGAP1Q96PV0 1343 aa9.99□□□□□ -0.81
HERPUD2-206ENST00000438224 IFIT3O14879 490 aaKnown RBP9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 MSCO60682 206 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 PPP1R11O60927 126 aaPredicted RBP9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 CDC45O75419 566 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 BAATQ14032 418 aaPredicted RBP9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 LRRC41Q15345 812 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 CDC37Q16543 378 aaPredicted RBP9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 TMEM63BQ5T3F8 832 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 NSMFQ6X4W1 530 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 SLC30A10Q6XR72 485 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 ADGRF4Q8IZF3 695 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 PDCD7Q8N8D1 485 aaKnown RBP9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 NCOA7Q8NI08 942 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 IGDCC4Q8TDY8 1250 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 TBC1D5Q92609 795 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 JMJD4Q9H9V9 463 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 ANO2Q9NQ90 1003 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 NRBP1Q9UHY1 535 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 MAD2L2Q9UI95 211 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
HERPUD2-206ENST00000438224 PALM3A6NDB9 673 aaPredicted RBP9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 MYADML2A6NDP7 307 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 OPLAHO14841 1288 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 ADAMTS4O75173 837 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 PGK1P00558 417 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 PARP1P09874 1014 aaKnown RBP9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 KCNA1Q09470 495 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 TROAPQ12815 778 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 TRDNQ13061 729 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 ACVR2BQ13705 512 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 GRM4Q14833 912 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 QRICH1Q2TAL8 776 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 USH1GQ495M9 461 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 KIAA1211Q6ZU35 1233 aa9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 RALYLQ86SE5 291 aaKnown RBP9.97□□□□□ -0.81
HERPUD2-206ENST00000438224 C7orf61Q8IZ16 206 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms