RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 RIC8AQ9NPQ8 531 aa19.28■□□□□ 0.68
CALD1-209ENST00000436461 BIN2Q9UBW5 565 aaPredicted RBP19.28■□□□□ 0.68
CALD1-209ENST00000436461 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
CALD1-209ENST00000436461 PLXNA1Q9UIW2 1896 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 VPS37CA5D8V6 355 aaPredicted RBP19.27■□□□□ 0.68
CALD1-209ENST00000436461 H3BQV1 296 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 MMP1P03956 469 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 COPB2P35606 906 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 NOM1Q5C9Z4 860 aaKnown RBP19.27■□□□□ 0.68
CALD1-209ENST00000436461 IFFO2Q5TF58 517 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 PLEKHH3Q7Z736 793 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 FCHSD1Q86WN1 690 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 TRIM47Q96LD4 638 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 C6orf50Q9HD87 102 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 CYP39A1Q9NYL5 469 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 FBXO40Q9UH90 709 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 PCDHA4Q9UN74 947 aa19.27■□□□□ 0.68
CALD1-209ENST00000436461 CASP8AP2Q9UKL3 1982 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 ESYT2A0FGR8 921 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
CALD1-209ENST00000436461 TNPO2O14787 897 aaKnown RBP19.26■□□□□ 0.67
CALD1-209ENST00000436461 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 FCER1AP12319 257 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 NR5A1Q13285 461 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 KCTD2Q14681 263 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 JAKMIP3Q5VZ66 844 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 MCF2L2Q86YR7 1114 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 DDX49Q9Y6V7 483 aaKnown RBP19.26■□□□□ 0.67
CALD1-209ENST00000436461 IVNS1ABPQ9Y6Y0 642 aa19.26■□□□□ 0.67
CALD1-209ENST00000436461 BTBD18B2RXH4 712 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 FOXN1O15353 648 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 HSPA1AP0DMV8 641 aaKnown RBP19.25■□□□□ 0.67
CALD1-209ENST00000436461 HSPA1BP0DMV9 641 aaKnown RBP19.25■□□□□ 0.67
CALD1-209ENST00000436461 PTPREP23469 700 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 ADORA2AP29274 412 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 GNA11P29992 359 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 HSD17B4P51659 736 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 CNTN2Q02246 1040 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 FOXD4L5Q5VV16 416 aaPredicted RBP19.25■□□□□ 0.67
CALD1-209ENST00000436461 DIS3L2Q8IYB7 885 aaKnown RBP19.25■□□□□ 0.67
CALD1-209ENST00000436461 BLIDQ8IZY5 108 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 SYTL5Q8TDW5 730 aaPredicted RBP19.25■□□□□ 0.67
CALD1-209ENST00000436461 FOXD4L4Q8WXT5 416 aaPredicted RBP19.25■□□□□ 0.67
CALD1-209ENST00000436461 KIF28PB7ZC32 967 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 FKTNO75072 461 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 KRT2P35908 639 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 MRPL12P52815 198 aaKnown RBP19.25■□□□□ 0.67
CALD1-209ENST00000436461 FCGRTP55899 365 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 GRB14Q14449 540 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 PCDHA6Q9UN73 950 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 PCDHA8Q9Y5H6 950 aa19.25■□□□□ 0.67
CALD1-209ENST00000436461 HTTP42858 3142 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 FAM205CA6NFA0 338 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 M0R2N6 131 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 STX6O43752 255 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 COBLO75128 1261 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 CLK2P49760 499 aaKnown RBP19.24■□□□□ 0.67
CALD1-209ENST00000436461 UBXN2AP68543 259 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 EARS2Q5JPH6 523 aaKnown RBP19.24■□□□□ 0.67
CALD1-209ENST00000436461 MCTP1Q6DN14 999 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 REXO1Q8N1G1 1221 aaKnown RBP19.24■□□□□ 0.67
CALD1-209ENST00000436461 TAAR1Q96RJ0 339 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 MTMR6Q9Y217 621 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 ASTN1O14525 1302 aa19.24■□□□□ 0.67
CALD1-209ENST00000436461 MYH7BA7E2Y1 1941 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 MCM3APO60318 1980 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 PIK3CDO00329 1044 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 PDCP20941 246 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 GHRHRQ02643 423 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 KIF22Q14807 665 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.23■□□□□ 0.67
CALD1-209ENST00000436461 FERMT3Q86UX7 667 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 DAGLBQ8NCG7 672 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 RGS22Q8NE09 1264 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 GABRQQ9UN88 632 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 PFASO15067 1338 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 ZNF236Q9UL36 1845 aa19.23■□□□□ 0.67
CALD1-209ENST00000436461 POTEB2H3BUK9 544 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 MORN1Q5T089 497 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 DNAJC25-GNG10A0A024R161 153 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 SOWAHBA6NEL2 793 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 STRNO43815 780 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 HSPA8P11142 646 aaKnown RBP19.22■□□□□ 0.67
CALD1-209ENST00000436461 CYP2B6P20813 491 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 PRKCZQ05513 592 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 SAFBQ15424 915 aaKnown RBP eCLIP19.22■□□□□ 0.67
CALD1-209ENST00000436461 GALNT17Q6IS24 598 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 FAM133AQ8N9E0 248 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 NPLOC4Q8TAT6 608 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 BICD2Q8TD16 824 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 TNFRSF25Q93038 417 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 ZFP91Q96JP5 570 aaPredicted RBP19.22■□□□□ 0.67
CALD1-209ENST00000436461 FGD4Q96M96 766 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 ANO3Q9BYT9 981 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 BRMS1Q9HCU9 246 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 GJD2Q9UKL4 321 aa19.22■□□□□ 0.67
CALD1-209ENST00000436461 SLC15A5A6NIM6 579 aa19.21■□□□□ 0.67
CALD1-209ENST00000436461 SPDYE3A6NKU9 549 aa19.21■□□□□ 0.67
CALD1-209ENST00000436461 EIF2AK2P19525 551 aaKnown RBP19.21■□□□□ 0.67
CALD1-209ENST00000436461 DDIT3P35638 169 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms