RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 ICAM1P05362 532 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 SLC16A2P36021 539 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 BAATQ14032 418 aaPredicted RBP13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 DUSP28Q4G0W2 176 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 FAM47CQ5HY64 1035 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 MORC4Q8TE76 937 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 WDR11Q9BZH6 1224 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 GPHNQ9NQX3 736 aaPredicted RBP13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 IL17RBQ9NRM6 502 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 TRMT13Q9NUP7 481 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 ADD3Q9UEY8 706 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 TCF20Q9UGU0 1960 aaKnown RBP13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 TNKSO95271 1327 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 LCTP09848 1927 aa13.72□□□□□ -0.21
CHRNA1-207ENST00000435083 RFXAPO00287 272 aa13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 PFKMP08237 780 aa13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 ALDH5A1P51649 535 aaPredicted RBP13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 TMEM67Q5HYA8 995 aa13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 VWCEQ96DN2 955 aa13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.21
CHRNA1-207ENST00000435083 PTPDC1A2A3K4 754 aa13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 CPT1AP50416 773 aa13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 PURAQ00577 322 aaKnown RBP13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 TFF2Q03403 129 aa13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 OR6J1Q8NGC5 347 aa13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 PPP1R13LQ8WUF5 828 aa13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 DCAF4Q8WV16 495 aa13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 RANBP17Q9H2T7 1088 aaKnown RBP13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 CERS4Q9HA82 394 aa13.71□□□□□ -0.22
CHRNA1-207ENST00000435083 SCN5AQ14524 2016 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 NFIBO00712 420 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 GTPBP6O43824 516 aaPredicted RBP13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 CA3P07451 260 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 ACTN1P12814 892 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 BMP1P13497 986 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 CALML3P27482 149 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 AAK1Q2M2I8 961 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 SYDE2Q5VT97 1194 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 PI4K2BQ8TCG2 481 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 MTG1Q9BT17 334 aaPredicted RBP13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
CHRNA1-207ENST00000435083 FOXP2O15409 715 aa13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 KCNQ1P51787 676 aa13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 BRDTQ58F21 947 aaPredicted RBP13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 OTUD7AQ8TE49 926 aaPredicted RBP13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 FTOQ9C0B1 505 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 FRMPD2Q68DX3 1309 aaPredicted RBP13.69□□□□□ -0.22
CHRNA1-207ENST00000435083 RBM47A0AV96 593 aaKnown RBP13.68□□□□□ -0.22
CHRNA1-207ENST00000435083 CHMP4BP1P59074 171 aa13.68□□□□□ -0.22
CHRNA1-207ENST00000435083 PDE4DQ08499 809 aa13.68□□□□□ -0.22
CHRNA1-207ENST00000435083 RRP12Q5JTH9 1297 aaKnown RBP13.68□□□□□ -0.22
CHRNA1-207ENST00000435083 BTNL9Q6UXG8 535 aa13.68□□□□□ -0.22
CHRNA1-207ENST00000435083 SLC30A10Q6XR72 485 aa13.68□□□□□ -0.22
CHRNA1-207ENST00000435083 LOC102724159A0A0B4J2E5 919 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 RFC2P35250 354 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 PPP2R5BQ15173 497 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 PWP2Q15269 919 aaKnown RBP13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 SLC9A7Q96T83 725 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 RAD50Q92878 1312 aa13.67□□□□□ -0.22
CHRNA1-207ENST00000435083 KIF28PB7ZC32 967 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 NKRFO15226 690 aaKnown RBP eCLIP13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 ORC4O43929 436 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 KPNA6O60684 536 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 IQCF3P0C7M6 154 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 POU3F3P20264 500 aaPredicted RBP13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 NOVP48745 357 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 KRT40Q6A162 431 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 PHOSPHO2Q8TCD6 241 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 CLEC4DQ8WXI8 215 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 COPS5Q92905 334 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 C1QTNF1Q9BXJ1 281 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 TXNP10599 105 aaKnown RBP13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 MX1P20591 662 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 TAP1Q03518 808 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 BFSP2Q13515 415 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 NFRKBQ6P4R8 1299 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 HERC6Q8IVU3 1022 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 SCFD2Q8WU76 684 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 FAM122AQ96E09 287 aa13.66□□□□□ -0.22
CHRNA1-207ENST00000435083 CHD9Q3L8U1 2897 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms