RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 PTGS1P23219 599 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 CPT1AP50416 773 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 BAATQ14032 418 aaPredicted RBP15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 FAM47CQ5HY64 1035 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 AKNAD1Q5T1N1 836 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 SYDE2Q5VT97 1194 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 PPP2R2DQ66LE6 453 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 TAPT1Q6NXT6 567 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 MICALL1Q8N3F8 863 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 ATXN2LQ8WWM7 1075 aaKnown RBP15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 NOC4LQ9BVI4 516 aaKnown RBP15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 WDR11Q9BZH6 1224 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 GPCPD1Q9NPB8 672 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 IL17RBQ9NRM6 502 aa15.79■□□□□ 0.12
CDC42EP1-204ENST00000434728 CALML3P27482 149 aa15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 ALDH5A1P51649 535 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 PDE4DQ08499 809 aa15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 DUSP28Q4G0W2 176 aa15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 OR6J1Q8NGC5 347 aa15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 EVI5LQ96CN4 794 aa15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 SCLYQ96I15 445 aa15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 PURBQ96QR8 312 aaKnown RBP15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 ALDH8A1Q9H2A2 487 aaPredicted RBP15.78■□□□□ 0.12
CDC42EP1-204ENST00000434728 NCOR1O75376 2440 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 LCTP09848 1927 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 B4DLN1 442 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 ORC4O43929 436 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 TOP1P11387 765 aaKnown RBP15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 ACTN1P12814 892 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 ATP2A2P16615 1042 aaKnown RBP15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 MRPL12P52815 198 aaKnown RBP15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 RABGGTBP53611 331 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 CHMP4BP1P59074 171 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 MRPS5P82675 430 aaKnown RBP15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 PPP2R5BQ15173 497 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 ANKRD45Q5TZF3 282 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 TTBK2Q6IQ55 1244 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 DEFB128Q7Z7B8 93 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 WNT8AQ9H1J5 351 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 RANBP17Q9H2T7 1088 aaKnown RBP15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 ANAPC4Q9UJX5 808 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 PNMA2Q9UL42 364 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 NOD1Q9Y239 953 aa15.77■□□□□ 0.12
CDC42EP1-204ENST00000434728 GRIN2DO15399 1336 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 TNKSO95271 1327 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 NFIBO00712 420 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 PFKMP08237 780 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 CYP2C9P11712 490 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 SKIV2LQ15477 1246 aaKnown RBP15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 VPS53Q5VIR6 699 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 RNF207Q6ZRF8 634 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 ASB2Q96Q27 587 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 MTG1Q9BT17 334 aaPredicted RBP15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 HELLSQ9NRZ9 838 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 TRMT13Q9NUP7 481 aaKnown RBP15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 YBX2Q9Y2T7 364 aaKnown RBP15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 PCDHB15Q9Y5E8 787 aa15.76■□□□□ 0.11
CDC42EP1-204ENST00000434728 LOC102724159A0A0B4J2E5 919 aa15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 PWP2Q15269 919 aaKnown RBP15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 TMEM63BQ5T3F8 832 aa15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 SLC30A10Q6XR72 485 aa15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 RETREG2Q8NC44 543 aa15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 ADAMTS19Q8TE59 1207 aa15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 TMEM47Q9BQJ4 181 aa15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 PCDHA11Q9Y5I1 949 aa15.75■□□□□ 0.11
CDC42EP1-204ENST00000434728 CHD7Q9P2D1 2997 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 NKRFO15226 690 aaKnown RBP eCLIP15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 FOXP2O15409 715 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 PURAQ00577 322 aaKnown RBP15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 ADGRE1Q14246 886 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 MCMDC2Q4G0Z9 681 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 TMEM67Q5HYA8 995 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 BTNL9Q6UXG8 535 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 MORC4Q8TE76 937 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 SCFD2Q8WU76 684 aa15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 FTOQ9C0B1 505 aaKnown RBP eCLIP15.74■□□□□ 0.11
CDC42EP1-204ENST00000434728 TRIM6-TRIM34B2RNG4 842 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 GTPBP6O43824 516 aaPredicted RBP15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 KPNA6O60684 536 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 FGAP02671 866 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 MYOGP15173 224 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 HAND2P61296 217 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 ALX1Q15699 326 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 USH1GQ495M9 461 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 MFSD6Q6ZSS7 791 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 UHRF1Q96T88 793 aaPredicted RBP15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 BDP1A6H8Y1 2624 aa15.73■□□□□ 0.11
CDC42EP1-204ENST00000434728 SCN5AQ14524 2016 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 TXNP10599 105 aaKnown RBP15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 PDHBP11177 359 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 RPS6P62753 249 aaKnown RBP15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 TTLL4Q14679 1199 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 AAK1Q2M2I8 961 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 NBPF20Q3BBV1 942 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 DNERQ8NFT8 737 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 FAM227BQ96M60 508 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 TCP11L1Q9NUJ3 509 aa15.72■□□□□ 0.11
CDC42EP1-204ENST00000434728 A0A0D9SFI3 127 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms