RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 NSMFQ6X4W1 530 aa26.59■■□□□ 1.85
SMARCAL1-208ENST00000434435 OXER1Q8TDS5 423 aa26.59■■□□□ 1.85
SMARCAL1-208ENST00000434435 MAP3K20Q9NYL2 800 aaKnown RBP26.59■■□□□ 1.85
SMARCAL1-208ENST00000434435 DOCK3Q8IZD9 2030 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 M0R2N6 131 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 MEIS2O14770 477 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 CLK2P49760 499 aaKnown RBP26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 HSD17B4P51659 736 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 NR5A1Q13285 461 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 WDR78Q5VTH9 848 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 FOXD4L5Q5VV16 416 aaPredicted RBP26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 MCTP2Q6DN12 878 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 USP17L6PQ6QN14 398 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 FERMT3Q86UX7 667 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 FOXD4L4Q8WXT5 416 aaPredicted RBP26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 PORCNQ9H237 461 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 RNF186Q9NXI6 227 aa26.58■■□□□ 1.85
SMARCAL1-208ENST00000434435 TCHHQ07283 1943 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 ADAMTS3O15072 1205 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 F13A1P00488 732 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 U2AF2P26368 475 aaKnown RBP eCLIP26.57■■□□□ 1.843e-6■■■□□ 17.1
SMARCAL1-208ENST00000434435 RESTQ13127 1097 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 AP3B2Q13367 1082 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 RNF207Q6ZRF8 634 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 RASGRP4Q8TDF6 673 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 TBC1D5Q92609 795 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 ZSCAN16Q9H4T2 348 aaPredicted RBP26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 EFCC1Q9HA90 598 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 A1CFQ9NQ94 594 aaKnown RBP26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 BIN2Q9UBW5 565 aaPredicted RBP26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 PCDHA6Q9UN73 950 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 ZDHHC9Q9Y397 364 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 PCDHA8Q9Y5H6 950 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 PFASO15067 1338 aa26.57■■□□□ 1.84
SMARCAL1-208ENST00000434435 ZSWIM8A7E2V4 1837 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 KIF28PB7ZC32 967 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 TRPA1O75762 1119 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 MAPK4P31152 587 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 HOXA13P31271 388 aaPredicted RBP26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 JAKMIP3Q5VZ66 844 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 KRT25Q7Z3Z0 450 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 TNFRSF25Q93038 417 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 TMEM260Q9NX78 707 aa26.56■■□□□ 1.84
SMARCAL1-208ENST00000434435 CCDC194A0A1B0GVG4 234 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 SPDYE3A6NKU9 549 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 TBC1D8O95759 1140 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 FOSP01100 380 aaPredicted RBP26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 RPS6P62753 249 aaKnown RBP26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 MAP2K1Q02750 393 aaPredicted RBP26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 SLC30A10Q6XR72 485 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 BRAPQ7Z569 592 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 NOSTRINQ8IVI9 506 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 ANKRD35Q8N283 1001 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 MMP19Q99542 508 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 SAGE1Q9NXZ1 904 aa26.55■■□□□ 1.84
SMARCAL1-208ENST00000434435 FCER1AP12319 257 aa26.54■■□□□ 1.84
SMARCAL1-208ENST00000434435 BAATQ14032 418 aaPredicted RBP26.54■■□□□ 1.84
SMARCAL1-208ENST00000434435 KCTD2Q14681 263 aa26.54■■□□□ 1.84
SMARCAL1-208ENST00000434435 R3HDMLQ9H3Y0 253 aa26.54■■□□□ 1.84
SMARCAL1-208ENST00000434435 CYP39A1Q9NYL5 469 aa26.54■■□□□ 1.84
SMARCAL1-208ENST00000434435 IVNS1ABPQ9Y6Y0 642 aa26.54■■□□□ 1.84
SMARCAL1-208ENST00000434435 FCHSD1Q86WN1 690 aa26.53■■□□□ 1.84
SMARCAL1-208ENST00000434435 SYTL5Q8TDW5 730 aaPredicted RBP26.53■■□□□ 1.84
SMARCAL1-208ENST00000434435 ANO3Q9BYT9 981 aa26.53■■□□□ 1.84
SMARCAL1-208ENST00000434435 EHMT1Q9H9B1 1298 aa26.53■■□□□ 1.84
SMARCAL1-208ENST00000434435 NONOQ15233 471 aaKnown RBP eCLIP26.52■■□□□ 1.84
SMARCAL1-208ENST00000434435 PIK3AP1Q6ZUJ8 805 aa26.52■■□□□ 1.84
SMARCAL1-208ENST00000434435 GPR142Q7Z601 462 aa26.52■■□□□ 1.84
SMARCAL1-208ENST00000434435 ABRAQ8N0Z2 381 aa26.52■■□□□ 1.84
SMARCAL1-208ENST00000434435 BEGAINQ9BUH8 593 aa26.52■■□□□ 1.84
SMARCAL1-208ENST00000434435 STRNO43815 780 aa26.51■■□□□ 1.83
SMARCAL1-208ENST00000434435 PLEKHH3Q7Z736 793 aa26.51■■□□□ 1.83
SMARCAL1-208ENST00000434435 PGBD1Q96JS3 809 aa26.51■■□□□ 1.83
SMARCAL1-208ENST00000434435 ATP6V1DQ9Y5K8 247 aa26.51■■□□□ 1.83
SMARCAL1-208ENST00000434435 LRRC37A2A6NM11 1700 aa26.51■■□□□ 1.83
SMARCAL1-208ENST00000434435 MCM3APO60318 1980 aa26.5■■□□□ 1.83
SMARCAL1-208ENST00000434435 NOM1Q5C9Z4 860 aaKnown RBP26.5■■□□□ 1.83
SMARCAL1-208ENST00000434435 EARS2Q5JPH6 523 aaKnown RBP26.5■■□□□ 1.83
SMARCAL1-208ENST00000434435 COL20A1Q9P218 1284 aa26.5■■□□□ 1.83
SMARCAL1-208ENST00000434435 NOL7Q9UMY1 257 aaKnown RBP26.5■■□□□ 1.83
SMARCAL1-208ENST00000434435 FAM205CA6NFA0 338 aa26.49■■□□□ 1.83
SMARCAL1-208ENST00000434435 POTEB2H3BUK9 544 aa26.49■■□□□ 1.83
SMARCAL1-208ENST00000434435 PTPREP23469 700 aa26.49■■□□□ 1.83
SMARCAL1-208ENST00000434435 DNAJC5GQ8N7S2 189 aa26.49■■□□□ 1.83
SMARCAL1-208ENST00000434435 CASP8AP2Q9UKL3 1982 aa26.49■■□□□ 1.83
SMARCAL1-208ENST00000434435 FRMPD4Q14CM0 1322 aa26.48■■□□□ 1.83
SMARCAL1-208ENST00000434435 SP3Q02447 781 aa26.48■■□□□ 1.83
SMARCAL1-208ENST00000434435 GRB14Q14449 540 aa26.48■■□□□ 1.83
SMARCAL1-208ENST00000434435 INF2Q27J81 1249 aa26.48■■□□□ 1.83
SMARCAL1-208ENST00000434435 MYSM1Q5VVJ2 828 aa26.48■■□□□ 1.83
SMARCAL1-208ENST00000434435 TBCKQ8TEA7 893 aa26.48■■□□□ 1.83
SMARCAL1-208ENST00000434435 KIAA1217Q5T5P2 1943 aa26.47■■□□□ 1.83
SMARCAL1-208ENST00000434435 SLC15A5A6NIM6 579 aa26.47■■□□□ 1.83
SMARCAL1-208ENST00000434435 ADORA2AP29274 412 aa26.47■■□□□ 1.83
SMARCAL1-208ENST00000434435 SREBF1P36956 1147 aa26.47■■□□□ 1.83
SMARCAL1-208ENST00000434435 FCGRTP55899 365 aa26.47■■□□□ 1.83
SMARCAL1-208ENST00000434435 LACTBP83111 547 aaPredicted RBP26.47■■□□□ 1.83
SMARCAL1-208ENST00000434435 KIF22Q14807 665 aa26.47■■□□□ 1.83
SMARCAL1-208ENST00000434435 RILPL1Q5EBL4 403 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms