RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 EEF2P13639 858 aaKnown RBP17.42■□□□□ 0.38
SCARF1-203ENST00000434376 NAP1L1P55209 391 aaKnown RBP17.42■□□□□ 0.38
SCARF1-203ENST00000434376 TBC1D8BQ0IIM8 1120 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 STIM1Q13586 685 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 CCDC174Q6PII3 467 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 KCNK18Q7Z418 384 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 SLF2Q8IX21 1173 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 ADD3Q9UEY8 706 aaKnown RBP17.42■□□□□ 0.38
SCARF1-203ENST00000434376 PCDHA1Q9Y5I3 950 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 DDX60Q8IY21 1712 aaKnown RBP17.42■□□□□ 0.38
SCARF1-203ENST00000434376 PHACTR2O75167 634 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 SRGNP10124 158 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 CAPN2P17655 700 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 APBA1Q02410 837 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 GPS2Q13227 327 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 CDAN1Q8IWY9 1227 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 ANKRD36CQ5JPF3 1778 aa17.42■□□□□ 0.38
SCARF1-203ENST00000434376 CCDC175P0C221 793 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 PCP11498 1178 aaKnown RBP17.41■□□□□ 0.38
SCARF1-203ENST00000434376 H2AFXP16104 143 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-203ENST00000434376 PLS1Q14651 629 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 PRR16Q569H4 304 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 NLRC4Q9NPP4 1024 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 AGPAT5Q9NUQ2 364 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 BCS1LQ9Y276 419 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 SFI1A8K8P3 1242 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 CYP2C19P33261 490 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 CERKLQ49MI3 558 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-203ENST00000434376 PSTPIP2Q9H939 334 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 C4AP0C0L4 1744 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 C4BP0C0L5 1744 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 E9PMD0 336 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
SCARF1-203ENST00000434376 MATR3P43243 847 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCARF1-203ENST00000434376 PPP4CP60510 307 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 BCAS3Q9H6U6 928 aa17.41■□□□□ 0.38
SCARF1-203ENST00000434376 FAM237AA0A1B0GTK4 181 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 TTC26A0AVF1 554 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 GH2P01242 217 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 ERCC5P28715 1186 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-203ENST00000434376 SMC1AQ14683 1233 aaKnown RBP17.4■□□□□ 0.38
SCARF1-203ENST00000434376 TCP11X2Q5H9J9 407 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 KRT26Q7Z3Y9 468 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 DNAAF5Q86Y56 855 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 C4orf32Q8N8J7 132 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 SMCR8Q8TEV9 937 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-203ENST00000434376 TBC1D22AQ8WUA7 517 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 JMJD4Q9H9V9 463 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 ATP6V0A2Q9Y487 856 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 CENPFP49454 3210 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 DDX39AO00148 427 aaKnown RBP17.4■□□□□ 0.38
SCARF1-203ENST00000434376 SRGAP2O75044 1071 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 TTLL1O95922 423 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 ZNF76P36508 570 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 ZNF658Q5TYW1 1059 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-203ENST00000434376 ANKRD40Q6AI12 368 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 NOC4LQ9BVI4 516 aaKnown RBP17.4■□□□□ 0.38
SCARF1-203ENST00000434376 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
SCARF1-203ENST00000434376 PPP1R11O60927 126 aaPredicted RBP17.39■□□□□ 0.38
SCARF1-203ENST00000434376 ZMYND10O75800 440 aa17.39■□□□□ 0.38
SCARF1-203ENST00000434376 CFBP00751 764 aa17.39■□□□□ 0.38
SCARF1-203ENST00000434376 SLC35F6Q8N357 371 aa17.39■□□□□ 0.38
SCARF1-203ENST00000434376 HOMER2Q9NSB8 354 aa17.39■□□□□ 0.38
SCARF1-203ENST00000434376 KIAA1024Q9UPX6 916 aa17.39■□□□□ 0.38
SCARF1-203ENST00000434376 MYH6P13533 1939 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 A0A1B0GTH6 734 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 SORBS3O60504 671 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 SLFN13Q68D06 897 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 KRT25Q7Z3Z0 450 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 KIAA1328Q86T90 577 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 TRIML1Q8N9V2 468 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 CYP2W1Q8TAV3 490 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 CCDC47Q96A33 483 aaKnown RBP17.39■□□□□ 0.37
SCARF1-203ENST00000434376 MTA3Q9BTC8 594 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 ANKRD65E5RJM6 399 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 H0YIN7 160 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 IL1R1P14778 569 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 RCAN1P53805 252 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 NCAPH2Q6IBW4 605 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 TRIM65Q6PJ69 517 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 TMEM139Q8IV31 216 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 CERKQ8TCT0 537 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 ARFGAP3Q9NP61 516 aa17.39■□□□□ 0.37
SCARF1-203ENST00000434376 TRIM66O15016 1216 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 KIF5CO60282 957 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 ECE2O60344 883 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 ICA1Q05084 483 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 CRY2Q49AN0 593 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 KRT79Q5XKE5 535 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 APOBEC3HQ6NTF7 200 aaKnown RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 SH3RF1Q7Z6J0 888 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 TUBGCP2Q9BSJ2 902 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 DDX25Q9UHL0 483 aaKnown RBP17.38■□□□□ 0.37
SCARF1-203ENST00000434376 ZBTB21Q9ULJ3 1066 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 DUSP10Q9Y6W6 482 aa17.38■□□□□ 0.37
SCARF1-203ENST00000434376 POTEB3A0JP26 581 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms