RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 SP3Q02447 781 aa14.13□□□□□ -0.15
LINC00339-204ENST00000434233 NPY5RQ15761 445 aa14.13□□□□□ -0.15
LINC00339-204ENST00000434233 RNF207Q6ZRF8 634 aa14.13□□□□□ -0.15
LINC00339-204ENST00000434233 ABRAQ8N0Z2 381 aa14.13□□□□□ -0.15
LINC00339-204ENST00000434233 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
LINC00339-204ENST00000434233 BRMS1Q9HCU9 246 aa14.13□□□□□ -0.15
LINC00339-204ENST00000434233 M0R2N6 131 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 GPR25O00155 361 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 FOSP01100 380 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-204ENST00000434233 FCER1AP12319 257 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 BAATQ14032 418 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-204ENST00000434233 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 NSMFQ6X4W1 530 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 PLEKHH3Q7Z736 793 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 ANKRD35Q8N283 1001 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 MMP19Q99542 508 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-204ENST00000434233 CYP39A1Q9NYL5 469 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 PCDHA6Q9UN73 950 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 PCDHA8Q9Y5H6 950 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 PFASO15067 1338 aa14.12□□□□□ -0.15
LINC00339-204ENST00000434233 SLC15A5A6NIM6 579 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 BTBD18B2RXH4 712 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 PTPREP23469 700 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC00339-204ENST00000434233 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
LINC00339-204ENST00000434233 NUCB2P80303 420 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 KCTD2Q14681 263 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 KIF22Q14807 665 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 DIS3L2Q8IYB7 885 aaKnown RBP14.11□□□□□ -0.15
LINC00339-204ENST00000434233 A1CFQ9NQ94 594 aaKnown RBP14.11□□□□□ -0.15
LINC00339-204ENST00000434233 BIN2Q9UBW5 565 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-204ENST00000434233 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-204ENST00000434233 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 IVNS1ABPQ9Y6Y0 642 aa14.11□□□□□ -0.15
LINC00339-204ENST00000434233 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-204ENST00000434233 ADAMTS3O15072 1205 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 FKTNO75072 461 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 FCGRTP55899 365 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 LACTBP83111 547 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-204ENST00000434233 AP3B2Q13367 1082 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 UBE2SQ16763 222 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 REXO1Q8N1G1 1221 aaKnown RBP14.1□□□□□ -0.15
LINC00339-204ENST00000434233 OXER1Q8TDS5 423 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-204ENST00000434233 TNFRSF25Q93038 417 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 ZSCAN16Q9H4T2 348 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-204ENST00000434233 MGAMO43451 1857 aa14.1□□□□□ -0.15
LINC00339-204ENST00000434233 DOCK3Q8IZD9 2030 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 DNAJC25-GNG10A0A024R161 153 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 SPDYE3A6NKU9 549 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 BRD1O95696 1058 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 ZSCAN22P10073 491 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-204ENST00000434233 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-204ENST00000434233 PSMC4P43686 418 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 GNL2Q13823 731 aaKnown RBP14.09□□□□□ -0.15
LINC00339-204ENST00000434233 GRB14Q14449 540 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 ARHGEF6Q15052 776 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 MORN1Q5T089 497 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 DNERQ8NFT8 737 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 TAAR1Q96RJ0 339 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 TMEM260Q9NX78 707 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 GJD2Q9UKL4 321 aa14.09□□□□□ -0.15
LINC00339-204ENST00000434233 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
LINC00339-204ENST00000434233 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 CCDC194A0A1B0GVG4 234 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 TNPO2O14787 897 aaKnown RBP14.08□□□□□ -0.16
LINC00339-204ENST00000434233 GNRH1P01148 92 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 CTGFP29279 349 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 NR5A1Q13285 461 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
LINC00339-204ENST00000434233 SLC30A10Q6XR72 485 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 NOSTRINQ8IVI9 506 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 RASGRP4Q8TDF6 673 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 USP6NLQ92738 828 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 NUDT12Q9BQG2 462 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 SLC5A4Q9NY91 659 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 CHMP5Q9NZZ3 219 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 COL20A1Q9P218 1284 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 ZDHHC9Q9Y397 364 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 PLXNB2O15031 1838 aa14.08□□□□□ -0.16
LINC00339-204ENST00000434233 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
LINC00339-204ENST00000434233 B4DLN1 442 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 KIF28PB7ZC32 967 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 COBLO75128 1261 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 HOXD10P28358 340 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 ADORA2AP29274 412 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 MAP2K5Q13163 448 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 PKP1Q13835 747 aa14.07□□□□□ -0.16
LINC00339-204ENST00000434233 NONOQ15233 471 aaKnown RBP eCLIP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms