RNA–Protein interactions for RNA: ENST00000431690.5

SNED1-207, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-207ENST00000431690 RPS6KB1P23443 525 aa18.16■□□□□ 0.5
SNED1-207ENST00000431690 ALDH5A1P51649 535 aaPredicted RBP18.16■□□□□ 0.5
SNED1-207ENST00000431690 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
SNED1-207ENST00000431690 APOA5Q6Q788 366 aa18.16■□□□□ 0.5
SNED1-207ENST00000431690 CCDC82Q8N4S0 544 aa18.16■□□□□ 0.5
SNED1-207ENST00000431690 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
SNED1-207ENST00000431690 SPZ1Q9BXG8 430 aa18.16■□□□□ 0.5
SNED1-207ENST00000431690 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
SNED1-207ENST00000431690 DDX49Q9Y6V7 483 aaKnown RBP18.16■□□□□ 0.5
SNED1-207ENST00000431690 ASTN1O14525 1302 aa18.16■□□□□ 0.5
SNED1-207ENST00000431690 B4DLN1 442 aa18.15■□□□□ 0.5
SNED1-207ENST00000431690 KBTBD13C9JR72 458 aa18.15■□□□□ 0.5
SNED1-207ENST00000431690 DNM1LO00429 736 aa18.15■□□□□ 0.5
SNED1-207ENST00000431690 EIF5BO60841 1220 aaKnown RBP18.15■□□□□ 0.5
SNED1-207ENST00000431690 SMARCA1P28370 1054 aa18.15■□□□□ 0.5
SNED1-207ENST00000431690 MNX1P50219 401 aaPredicted RBP18.15■□□□□ 0.5
SNED1-207ENST00000431690 MRPL12P52815 198 aaKnown RBP18.15■□□□□ 0.5
SNED1-207ENST00000431690 CCDC144BQ3MJ40 725 aa18.15■□□□□ 0.5
SNED1-207ENST00000431690 NOL8Q76FK4 1167 aaKnown RBP18.15■□□□□ 0.5
SNED1-207ENST00000431690 SRBD1Q8N5C6 995 aaKnown RBP18.15■□□□□ 0.5
SNED1-207ENST00000431690 LENG1Q96BZ8 264 aaPredicted RBP18.15■□□□□ 0.5
SNED1-207ENST00000431690 RBM28Q9NW13 759 aaKnown RBP18.15■□□□□ 0.5
SNED1-207ENST00000431690 PGK1P00558 417 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 PDE4DQ08499 809 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 RTN1Q16799 776 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 RNF180Q86T96 592 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 FBXO16Q8IX29 292 aaPredicted RBP18.14■□□□□ 0.49
SNED1-207ENST00000431690 DNERQ8NFT8 737 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 SYTL5Q8TDW5 730 aaPredicted RBP18.14■□□□□ 0.49
SNED1-207ENST00000431690 BRF1Q92994 677 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 SENP6Q9GZR1 1112 aaPredicted RBP18.14■□□□□ 0.49
SNED1-207ENST00000431690 MAF1Q9H063 256 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 BRCA2P51587 3418 aa18.14■□□□□ 0.49
SNED1-207ENST00000431690 LOC102724159A0A0B4J2E5 919 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 GOLGA8AA7E2F4 631 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 GOLGA8BA8MQT2 603 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 APOBRQ0VD83 1088 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 PWP2Q15269 919 aaKnown RBP18.13■□□□□ 0.49
SNED1-207ENST00000431690 TMTC3Q6ZXV5 915 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 RUFY3Q7L099 469 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 TAAR1Q96RJ0 339 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 KATNBL1Q9H079 304 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 SPC25Q9HBM1 224 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 CYP46A1Q9Y6A2 500 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 MYH6P13533 1939 aa18.13■□□□□ 0.49
SNED1-207ENST00000431690 EVI5O60447 810 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 ADCYAP1R1P41586 468 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 TNFAIP2Q03169 654 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 LRRC41Q15345 812 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 ARHGEF16Q5VV41 709 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 MORC4Q8TE76 937 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 NSUN6Q8TEA1 469 aaKnown RBP18.12■□□□□ 0.49
SNED1-207ENST00000431690 RMDN3Q96TC7 470 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 ZSWIM6Q9HCJ5 1215 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 VTA1Q9NP79 307 aa18.12■□□□□ 0.49
SNED1-207ENST00000431690 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.11■□□□□ 0.49
SNED1-207ENST00000431690 hCG_1642624A0A1W2PR95 340 aa18.11■□□□□ 0.49
SNED1-207ENST00000431690 GCOM1H8Y6P7 765 aaPredicted RBP18.11■□□□□ 0.49
SNED1-207ENST00000431690 DUSP11O75319 330 aaKnown RBP18.11■□□□□ 0.49
SNED1-207ENST00000431690 POLR2MP0CAP2 368 aa18.11■□□□□ 0.49
SNED1-207ENST00000431690 COL6A1P12109 1028 aa18.11■□□□□ 0.49
SNED1-207ENST00000431690 HOXA13P31271 388 aaPredicted RBP18.11■□□□□ 0.49
SNED1-207ENST00000431690 METAP2P50579 478 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNED1-207ENST00000431690 PDGFCQ9NRA1 345 aa18.11■□□□□ 0.49
SNED1-207ENST00000431690 MAP3K20Q9NYL2 800 aaKnown RBP18.11■□□□□ 0.49
SNED1-207ENST00000431690 COL20A1Q9P218 1284 aa18.11■□□□□ 0.49
SNED1-207ENST00000431690 FRMPD3Q5JV73 1810 aa18.11■□□□□ 0.49
SNED1-207ENST00000431690 MCM3APO60318 1980 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 SYNRGQ9UMZ2 1314 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 OPLAHO14841 1288 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 C6orf222P0C671 652 aaPredicted RBP18.1■□□□□ 0.49
SNED1-207ENST00000431690 EIF2AK2P19525 551 aaKnown RBP18.1■□□□□ 0.49
SNED1-207ENST00000431690 HSD17B4P51659 736 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 ATN1P54259 1190 aaPredicted RBP18.1■□□□□ 0.49
SNED1-207ENST00000431690 PRPF38BQ5VTL8 546 aaKnown RBP18.1■□□□□ 0.49
SNED1-207ENST00000431690 IQSEC1Q6DN90 963 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 TAPT1Q6NXT6 567 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 FCHSD1Q86WN1 690 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 SAMD3Q8N6K7 520 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 UPF3BQ9BZI7 483 aaKnown RBP18.1■□□□□ 0.49
SNED1-207ENST00000431690 TM6SF1Q9BZW5 370 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 NR2E3Q9Y5X4 410 aa18.1■□□□□ 0.49
SNED1-207ENST00000431690 BAZ2BQ9UIF8 2168 aaKnown RBP18.1■□□□□ 0.49
SNED1-207ENST00000431690 CCDC196A0A1B0GTZ2 297 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 ADCY6O43306 1168 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 RCAN1P53805 252 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 HEATR3Q7Z4Q2 680 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 FBXL16Q8N461 479 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 CUL5Q93034 780 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 FERMT2Q96AC1 680 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 IWS1Q96ST2 819 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 AP5M1Q9H0R1 490 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 PDRG1Q9NUG6 133 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 LCTP09848 1927 aa18.09■□□□□ 0.49
SNED1-207ENST00000431690 DYNC1LI2O43237 492 aaPredicted RBP18.08■□□□□ 0.48
SNED1-207ENST00000431690 ADAMTS4O75173 837 aa18.08■□□□□ 0.48
SNED1-207ENST00000431690 SMPD1P17405 629 aa18.08■□□□□ 0.48
SNED1-207ENST00000431690 EDNRBP24530 442 aa18.08■□□□□ 0.48
SNED1-207ENST00000431690 CDC27P30260 824 aa18.08■□□□□ 0.48
SNED1-207ENST00000431690 PPP2R5BQ15173 497 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms