RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 DNERQ8NFT8 737 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 RNPC3Q96LT9 517 aaKnown RBP17.74■□□□□ 0.43
HERC3-206ENST00000431413 PURBQ96QR8 312 aaKnown RBP17.74■□□□□ 0.43
HERC3-206ENST00000431413 MAF1Q9H063 256 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 PDGFCQ9NRA1 345 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 ZSWIM5Q9P217 1185 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 TBX21Q9UL17 535 aa17.74■□□□□ 0.43
HERC3-206ENST00000431413 RAD50Q92878 1312 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 RPS6P62753 249 aaKnown RBP17.73■□□□□ 0.43
HERC3-206ENST00000431413 SMAD3P84022 425 aaKnown RBP17.73■□□□□ 0.43
HERC3-206ENST00000431413 PDE4DQ08499 809 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 TRDNQ13061 729 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 DUSP28Q4G0W2 176 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 BRDTQ58F21 947 aaPredicted RBP17.73■□□□□ 0.43
HERC3-206ENST00000431413 MFSD5Q6N075 450 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 CXCL17Q6UXB2 119 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 RGS22Q8NE09 1264 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 CLEC4DQ8WXI8 215 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
HERC3-206ENST00000431413 TNKSO95271 1327 aa17.72■□□□□ 0.43
HERC3-206ENST00000431413 DHX16O60231 1041 aaKnown RBP17.72■□□□□ 0.43
HERC3-206ENST00000431413 PARP1P09874 1014 aaKnown RBP17.72■□□□□ 0.43
HERC3-206ENST00000431413 PPIGQ13427 754 aaKnown RBP eCLIP17.72■□□□□ 0.43
HERC3-206ENST00000431413 ITGA7Q13683 1181 aa17.72■□□□□ 0.43
HERC3-206ENST00000431413 USH1GQ495M9 461 aa17.72■□□□□ 0.43
HERC3-206ENST00000431413 SLC30A10Q6XR72 485 aa17.72■□□□□ 0.43
HERC3-206ENST00000431413 FAM126BQ8IXS8 530 aa17.72■□□□□ 0.43
HERC3-206ENST00000431413 TMEM199Q8N511 208 aa17.72■□□□□ 0.43
HERC3-206ENST00000431413 ENAHQ8N8S7 591 aaPredicted RBP17.72■□□□□ 0.43
HERC3-206ENST00000431413 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
HERC3-206ENST00000431413 DDX49Q9Y6V7 483 aaKnown RBP17.72■□□□□ 0.43
HERC3-206ENST00000431413 CPT1AP50416 773 aa17.71■□□□□ 0.43
HERC3-206ENST00000431413 CDC37Q16543 378 aaPredicted RBP17.71■□□□□ 0.43
HERC3-206ENST00000431413 IFIT1BQ5T764 474 aaKnown RBP17.71■□□□□ 0.43
HERC3-206ENST00000431413 MCF2L2Q86YR7 1114 aa17.71■□□□□ 0.43
HERC3-206ENST00000431413 POLR3EQ9NVU0 708 aa17.71■□□□□ 0.43
HERC3-206ENST00000431413 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
HERC3-206ENST00000431413 ABCB11O95342 1321 aa17.71■□□□□ 0.42
HERC3-206ENST00000431413 NKRFO15226 690 aaKnown RBP eCLIP17.7■□□□□ 0.42
HERC3-206ENST00000431413 PDE4AP27815 886 aa17.7■□□□□ 0.42
HERC3-206ENST00000431413 EPHB4P54760 987 aa17.7■□□□□ 0.42
HERC3-206ENST00000431413 PPP2R5BQ15173 497 aa17.7■□□□□ 0.42
HERC3-206ENST00000431413 ADGRF4Q8IZF3 695 aa17.7■□□□□ 0.42
HERC3-206ENST00000431413 SLC43A3Q8NBI5 491 aa17.7■□□□□ 0.42
HERC3-206ENST00000431413 SCFD2Q8WU76 684 aa17.7■□□□□ 0.42
HERC3-206ENST00000431413 FAM161BQ96MY7 647 aa17.7■□□□□ 0.42
HERC3-206ENST00000431413 GPHNQ9NQX3 736 aaPredicted RBP17.7■□□□□ 0.42
HERC3-206ENST00000431413 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.69■□□□□ 0.42
HERC3-206ENST00000431413 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.69■□□□□ 0.42
HERC3-206ENST00000431413 RBM47A0AV96 593 aaKnown RBP17.69■□□□□ 0.42
HERC3-206ENST00000431413 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
HERC3-206ENST00000431413 PPP1R12CQ9BZL4 782 aa17.69■□□□□ 0.42
HERC3-206ENST00000431413 CPVLQ9H3G5 476 aa17.69■□□□□ 0.42
HERC3-206ENST00000431413 MRPL11Q9Y3B7 192 aaKnown RBP17.69■□□□□ 0.42
HERC3-206ENST00000431413 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 TMEM265A0A087WTH1 108 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 ERICH2A1L162 156 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 CD4P01730 458 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 EDNRBP24530 442 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 FBXO11Q86XK2 927 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 OR6J1Q8NGC5 347 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 VAT1LQ9HCJ6 419 aa17.68■□□□□ 0.42
HERC3-206ENST00000431413 KPNA6O60684 536 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 SUPT20HL2P0C7V6 817 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 TXNP10599 105 aaKnown RBP17.67■□□□□ 0.42
HERC3-206ENST00000431413 CSF2RAP15509 400 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 CHMLP26374 656 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
HERC3-206ENST00000431413 TRAF1Q13077 416 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 TTLL4Q14679 1199 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
HERC3-206ENST00000431413 QRICH1Q2TAL8 776 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 TMEM63BQ5T3F8 832 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 PSRC1Q6PGN9 363 aaPredicted RBP17.67■□□□□ 0.42
HERC3-206ENST00000431413 RALYLQ86SE5 291 aaKnown RBP17.67■□□□□ 0.42
HERC3-206ENST00000431413 NSUN6Q8TEA1 469 aaKnown RBP17.67■□□□□ 0.42
HERC3-206ENST00000431413 GUCD1Q96NT3 240 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 IL25Q9H293 177 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 SEMA6BQ9H3T3 888 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 HIPK3Q9H422 1215 aa17.67■□□□□ 0.42
HERC3-206ENST00000431413 KLRF2D3W0D1 207 aa17.66■□□□□ 0.42
HERC3-206ENST00000431413 MYL3P08590 195 aa17.66■□□□□ 0.42
HERC3-206ENST00000431413 PTGS1P23219 599 aa17.66■□□□□ 0.42
HERC3-206ENST00000431413 IWS1Q96ST2 819 aa17.66■□□□□ 0.42
HERC3-206ENST00000431413 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.66■□□□□ 0.42
HERC3-206ENST00000431413 MTG1Q9BT17 334 aaPredicted RBP17.66■□□□□ 0.42
HERC3-206ENST00000431413 AMNQ9BXJ7 453 aa17.66■□□□□ 0.42
HERC3-206ENST00000431413 MTIF3Q9H2K0 278 aaKnown RBP17.66■□□□□ 0.42
HERC3-206ENST00000431413 JMJD4Q9H9V9 463 aa17.66■□□□□ 0.42
HERC3-206ENST00000431413 LRRC37A2A6NM11 1700 aa17.66■□□□□ 0.42
HERC3-206ENST00000431413 CYP2C18P33260 490 aa17.65■□□□□ 0.42
HERC3-206ENST00000431413 PSMC6P62333 389 aa17.65■□□□□ 0.42
HERC3-206ENST00000431413 PURAQ00577 322 aaKnown RBP17.65■□□□□ 0.42
HERC3-206ENST00000431413 SEC23AQ15436 765 aa17.65■□□□□ 0.42
HERC3-206ENST00000431413 STXBP2Q15833 593 aa17.65■□□□□ 0.42
HERC3-206ENST00000431413 NCOA7Q8NI08 942 aa17.65■□□□□ 0.42
HERC3-206ENST00000431413 SYTL5Q8TDW5 730 aaPredicted RBP17.65■□□□□ 0.42
HERC3-206ENST00000431413 RMDN3Q96TC7 470 aa17.65■□□□□ 0.42
HERC3-206ENST00000431413 CDX2Q99626 313 aaPredicted RBP17.65■□□□□ 0.42
HERC3-206ENST00000431413 IL23AQ9NPF7 189 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms