RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 SLU7O95391 586 aaKnown RBP10.9□□□□□ -0.66
NEDD1-203ENST00000429527 SLC20A2Q08357 652 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 PTPAQ15257 358 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 ARMCX5Q6P1M9 558 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 BICD2Q8TD16 824 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 TSC1Q92574 1164 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 DYNLL2Q96FJ2 89 aa10.9□□□□□ -0.66
NEDD1-203ENST00000429527 SKILP12757 684 aa10.9□□□□□ -0.67
NEDD1-203ENST00000429527 ICA1Q05084 483 aa10.9□□□□□ -0.67
NEDD1-203ENST00000429527 PTPN14Q15678 1187 aa10.9□□□□□ -0.67
NEDD1-203ENST00000429527 KIAA1755Q5JYT7 1200 aa10.9□□□□□ -0.67
NEDD1-203ENST00000429527 PPP1R13BQ96KQ4 1090 aa10.9□□□□□ -0.67
NEDD1-203ENST00000429527 MAP3K14Q99558 947 aa10.9□□□□□ -0.67
NEDD1-203ENST00000429527 MTMR4Q9NYA4 1195 aa10.9□□□□□ -0.67
NEDD1-203ENST00000429527 TFIP11Q9UBB9 837 aaKnown RBP10.9□□□□□ -0.67
NEDD1-203ENST00000429527 USP27XA6NNY8 438 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 GOLGA6L19H0YKK7 550 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 KINO60870 393 aaKnown RBP10.89□□□□□ -0.67
NEDD1-203ENST00000429527 COG2Q14746 738 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 SLC39A14Q15043 492 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 TERF2Q15554 542 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 TRIM65Q6PJ69 517 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 BTNL9Q6UXG8 535 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 SPATA20Q8TB22 786 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 MROH8Q9H579 483 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 TXNRD2Q9NNW7 524 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 STRNO43815 780 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 DHX16O60231 1041 aaKnown RBP10.89□□□□□ -0.67
NEDD1-203ENST00000429527 SLC25A27O95847 323 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 NKX3-2P78367 333 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 CCNA1P78396 465 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 IRX3P78415 501 aaPredicted RBP10.89□□□□□ -0.67
NEDD1-203ENST00000429527 PDE4BQ07343 736 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 CCDC178Q5BJE1 867 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 RIOX2Q8IUF8 465 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 COA7Q96BR5 231 aa10.89□□□□□ -0.67
NEDD1-203ENST00000429527 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
NEDD1-203ENST00000429527 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 GRK4P32298 578 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 GJA8P48165 433 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 MDM2Q00987 491 aaPredicted RBP10.88□□□□□ -0.67
NEDD1-203ENST00000429527 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
NEDD1-203ENST00000429527 MYSM1Q5VVJ2 828 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 CCDC84Q86UT8 332 aaPredicted RBP10.88□□□□□ -0.67
NEDD1-203ENST00000429527 SGMS1Q86VZ5 419 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 SHISA4Q96DD7 197 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF446Q9NWS9 450 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 TACC3Q9Y6A5 838 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 H3BQV1 296 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 GJB1P08034 283 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 EEF2P13639 858 aaKnown RBP10.88□□□□□ -0.67
NEDD1-203ENST00000429527 PTPREP23469 700 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 ANTXR2P58335 489 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 PRKCZQ05513 592 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 RESP18Q5W5W9 173 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 SLC44A5Q8NCS7 719 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 APBA2Q99767 749 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 NBPF3Q9H094 633 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 PPP1R9AQ9ULJ8 1098 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 SNHG28P0DPA3 235 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 PLEKHH3Q7Z736 793 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
NEDD1-203ENST00000429527 C16orf45Q96MC5 204 aaPredicted RBP10.88□□□□□ -0.67
NEDD1-203ENST00000429527 PNMA2Q9UL42 364 aa10.88□□□□□ -0.67
NEDD1-203ENST00000429527 TTLL1O95922 423 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 HMGCRP04035 888 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 SARSP49591 514 aaKnown RBP10.87□□□□□ -0.67
NEDD1-203ENST00000429527 UBXN2AP68543 259 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 MLLT1Q03111 559 aaPredicted RBP10.87□□□□□ -0.67
NEDD1-203ENST00000429527 TPD52L1Q16890 204 aaPredicted RBP10.87□□□□□ -0.67
NEDD1-203ENST00000429527 TKFCQ3LXA3 575 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 FSIP1Q8NA03 581 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF579Q8NAF0 562 aaKnown RBP10.87□□□□□ -0.67
NEDD1-203ENST00000429527 BTBD7Q9P203 1132 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 GABRQQ9UN88 632 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 CYP2D7A0A087X1C5 515 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 TPM1P09493 284 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF18P17022 549 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 NDUFA8P51970 172 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 ANKRD13CQ8N6S4 541 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 SMCR8Q8TEV9 937 aaPredicted RBP10.87□□□□□ -0.67
NEDD1-203ENST00000429527 DCAF4Q8WV16 495 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 SEC62Q99442 399 aaKnown RBP10.87□□□□□ -0.67
NEDD1-203ENST00000429527 ZNF215Q9UL58 517 aaPredicted RBP10.87□□□□□ -0.67
NEDD1-203ENST00000429527 FHOD1Q9Y613 1164 aa10.87□□□□□ -0.67
NEDD1-203ENST00000429527 RGS2P41220 211 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 MAP2K5Q13163 448 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 SLC9C1Q4G0N8 1177 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 VSTM4Q8IW00 320 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 NAPBQ9H115 298 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 GOLGA6L9A6NEM1 432 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 TDO2P48775 406 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 APOBRQ0VD83 1088 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 FBXO38Q6PIJ6 1188 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 FAM160B2Q86V87 743 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 REXO1L1PQ8IX06 675 aa10.86□□□□□ -0.67
NEDD1-203ENST00000429527 TRIML1Q8N9V2 468 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms