RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 NAIF1Q69YI7 327 aaPredicted RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 RUFY4Q6ZNE9 571 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 GIMAP8Q8ND71 665 aaPredicted RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 AIDAQ96BJ3 306 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 GUCA1BQ9UMX6 200 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 BTBD11A6QL63 1104 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 ZMYND10O75800 440 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 NF2P35240 595 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 SNCBQ16143 134 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 PTPN21Q16825 1174 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 PDXDC2PQ6P474 469 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 PARP9Q8IXQ6 854 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 IFT20Q8IY31 132 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 LMBR1Q8WVP7 490 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 SLC5A4Q9NY91 659 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 NAV1Q8NEY1 1877 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 RBAK-RBAKDNI3L0D1 243 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 ENC1O14682 589 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 RXRBP28702 533 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 GUCY1A3Q02108 690 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 PAK2Q13177 524 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 PDCD2Q16342 344 aaPredicted RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 ZNF790Q6PG37 636 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 MTHFD1LQ6UB35 978 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 DIS3L2Q8IYB7 885 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 FBXW7Q969H0 707 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 TSGA10Q9BZW7 698 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 NDST4Q9H3R1 872 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 HOXA7P31268 230 aaPredicted RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 ZNF131P52739 623 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 KLHDC7AQ5VTJ3 777 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 TLCD1Q96CP7 247 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 SH2D4AQ9H788 454 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 ZNHIT6Q9NWK9 470 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 SCN5AQ14524 2016 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 MDC1Q14676 2089 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 GPAA1O43292 621 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 RANBP6O60518 1105 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 AKAP17AQ02040 695 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 SAFBQ15424 915 aaKnown RBP eCLIP5.7□□□□□ -1.54e-7■□□□□ 10.5
RIF1-203ENST00000428287 UAP1Q16222 522 aaPredicted RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 MIS18BP1Q6P0N0 1132 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 NLRP14Q86W24 1093 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 ADSSL1Q8N142 457 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 TMTC2Q8N394 836 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 AGPAT5Q9NUQ2 364 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 CEP131Q9UPN4 1083 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 RNF113AO15541 343 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 ASAP2O43150 1006 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 EIF2S2P20042 333 aaKnown RBP5.7□□□□□ -1.5
RIF1-203ENST00000428287 SCFD2Q8WU76 684 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 TNFRSF25Q93038 417 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 SPDL1Q96EA4 605 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 ADAM7Q9H2U9 754 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 TSKSQ9UJT2 592 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 NDUFB9Q9Y6M9 179 aa5.7□□□□□ -1.5
RIF1-203ENST00000428287 TRIM75PA6NK02 468 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 CCT8L1PA6NM43 557 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 ZNF213O14771 459 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 IPO7O95373 1038 aaKnown RBP5.69□□□□□ -1.5
RIF1-203ENST00000428287 FERP16591 822 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 METAP2P50579 478 aaKnown RBP eCLIP5.69□□□□□ -1.5
RIF1-203ENST00000428287 UBE3CQ15386 1083 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 NAALADL2Q58DX5 795 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 SPECC1Q5M775 1068 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 PHKBQ93100 1093 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 FAM212AQ96EL1 285 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 TAF1DQ9H5J8 278 aaPredicted RBP5.69□□□□□ -1.5
RIF1-203ENST00000428287 ZSWIM5Q9P217 1185 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 ARHGAP20Q9P2F6 1191 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 MAP1BP46821 2468 aaKnown RBP5.69□□□□□ -1.5
RIF1-203ENST00000428287 SRGAP2O75044 1071 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 ANP32DO95626 131 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 PAFAH1B1P43034 410 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 FOXO4P98177 505 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 SEPT2Q15019 361 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 AGBL2Q5U5Z8 902 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 NKX2-3Q8TAU0 364 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 SEC16BQ96JE7 1060 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 CCDC114Q96M63 670 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 GDAP1L1Q96MZ0 367 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 SCN7AQ01118 1682 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 NLRP6P59044 892 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 TFCP2Q12800 502 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 CFAP58Q5T655 872 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 WASF1Q92558 559 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 L3MBTL3Q96JM7 780 aaPredicted RBP5.69□□□□□ -1.5
RIF1-203ENST00000428287 SPAG5Q96R06 1193 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 ZNF185O15231 689 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 AHCYL1O43865 530 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 RPS6KA3P51812 740 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 NR5A1Q13285 461 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 CFAP221Q4G0U5 840 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 KIAA1328Q86T90 577 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 CRACR2BQ8N4Y2 399 aaPredicted RBP5.69□□□□□ -1.5
RIF1-203ENST00000428287 TXLNGYQ9BZA5 131 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 SALL4Q9UJQ4 1053 aa5.69□□□□□ -1.5
RIF1-203ENST00000428287 DRD4P21917 467 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms