RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 ADD3Q9UEY8 706 aaKnown RBP19.38■□□□□ 0.69
VRK2-204ENST00000428021 BRPF3Q9ULD4 1205 aa19.38■□□□□ 0.69
VRK2-204ENST00000428021 CEP290O15078 2479 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 LOC102724159A0A0B4J2E5 919 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 PNMA6FA0A0J9YX94 578 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 CALM1P0DP23 149 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 CALM2P0DP24 149 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 CALM3P0DP25 149 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 PWP2Q15269 919 aaKnown RBP19.37■□□□□ 0.69
VRK2-204ENST00000428021 LRRC41Q15345 812 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 PRPF38BQ5VTL8 546 aaKnown RBP19.37■□□□□ 0.69
VRK2-204ENST00000428021 APOA5Q6Q788 366 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 FANCBQ8NB91 859 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 SYTL5Q8TDW5 730 aaPredicted RBP19.37■□□□□ 0.69
VRK2-204ENST00000428021 DPF3Q92784 378 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 LZTS2Q9BRK4 669 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 COL20A1Q9P218 1284 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 PCDHA1Q9Y5I3 950 aa19.37■□□□□ 0.69
VRK2-204ENST00000428021 ADAMTS4O75173 837 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 DUSP11O75319 330 aaKnown RBP19.36■□□□□ 0.69
VRK2-204ENST00000428021 PGK1P00558 417 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 GNAQP50148 359 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 GHRHRQ02643 423 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 TAPT1Q6NXT6 567 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 MICU3Q86XE3 530 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 MCF2L2Q86YR7 1114 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 CMTR1Q8N1G2 835 aaKnown RBP19.36■□□□□ 0.69
VRK2-204ENST00000428021 DNERQ8NFT8 737 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 PIBF1Q8WXW3 757 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 PDGFCQ9NRA1 345 aa19.36■□□□□ 0.69
VRK2-204ENST00000428021 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.35■□□□□ 0.69
VRK2-204ENST00000428021 RPS6KB1P23443 525 aa19.35■□□□□ 0.69
VRK2-204ENST00000428021 EDNRBP24530 442 aa19.35■□□□□ 0.69
VRK2-204ENST00000428021 HSD17B4P51659 736 aa19.35■□□□□ 0.69
VRK2-204ENST00000428021 BLOC1S2Q6QNY1 142 aa19.35■□□□□ 0.69
VRK2-204ENST00000428021 EEPD1Q7L9B9 569 aa19.35■□□□□ 0.69
VRK2-204ENST00000428021 FBXO16Q8IX29 292 aaPredicted RBP19.35■□□□□ 0.69
VRK2-204ENST00000428021 TAAR1Q96RJ0 339 aa19.35■□□□□ 0.69
VRK2-204ENST00000428021 SYNRGQ9UMZ2 1314 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 H0YGN5 161 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 ADCYAP1R1P41586 468 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 IRX5P78411 483 aaPredicted RBP19.34■□□□□ 0.69
VRK2-204ENST00000428021 TMEM63BQ5T3F8 832 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 SYNE3Q6ZMZ3 975 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 Q6ZUG5 572 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 TMTC3Q6ZXV5 915 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 FBXL16Q8N461 479 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 KLHDC9Q8NEP7 349 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 AGXT2Q9BYV1 514 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 SENP6Q9GZR1 1112 aaPredicted RBP19.34■□□□□ 0.69
VRK2-204ENST00000428021 VTA1Q9NP79 307 aa19.34■□□□□ 0.69
VRK2-204ENST00000428021 KLF18A0A0U1RQI7 1052 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 KBTBD13C9JR72 458 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 ZBTB43O43298 467 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 CFBP00751 764 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
VRK2-204ENST00000428021 CASTP20810 708 aaKnown RBP19.33■□□□□ 0.68
VRK2-204ENST00000428021 PSMA5P28066 241 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 TNFAIP2Q03169 654 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 TRAF1Q13077 416 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 LRRC26Q2I0M4 334 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 IQSEC1Q6DN90 963 aa19.33■□□□□ 0.68
VRK2-204ENST00000428021 RRP36Q96EU6 259 aaKnown RBP19.33■□□□□ 0.68
VRK2-204ENST00000428021 UPF3AQ9H1J1 476 aaKnown RBP19.33■□□□□ 0.68
VRK2-204ENST00000428021 FAM217BQ9NTX9 383 aaPredicted RBP19.33■□□□□ 0.68
VRK2-204ENST00000428021 GNEQ9Y223 722 aaKnown RBP19.33■□□□□ 0.68
VRK2-204ENST00000428021 RBM47A0AV96 593 aaKnown RBP19.32■□□□□ 0.68
VRK2-204ENST00000428021 MYADML2A6NDP7 307 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 CTAGE5O15320 804 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 EVI5O60447 810 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 SMPD1P17405 629 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 PTGS1P23219 599 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 GJA9P57773 515 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 NKX3-2P78367 333 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 APOBRQ0VD83 1088 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 FUT2Q10981 343 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 CCSAPQ6IQ19 270 aaPredicted RBP19.32■□□□□ 0.68
VRK2-204ENST00000428021 RNF180Q86T96 592 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 CCDC82Q8N4S0 544 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 ZSWIM6Q9HCJ5 1215 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 PHF24Q9UPV7 400 aa19.32■□□□□ 0.68
VRK2-204ENST00000428021 HOXA13P31271 388 aaPredicted RBP19.31■□□□□ 0.68
VRK2-204ENST00000428021 RCAN1P53805 252 aa19.31■□□□□ 0.68
VRK2-204ENST00000428021 PDE4DQ08499 809 aa19.31■□□□□ 0.68
VRK2-204ENST00000428021 RTN1Q16799 776 aa19.31■□□□□ 0.68
VRK2-204ENST00000428021 SAMD3Q8N6K7 520 aa19.31■□□□□ 0.68
VRK2-204ENST00000428021 NSUN6Q8TEA1 469 aaKnown RBP19.31■□□□□ 0.68
VRK2-204ENST00000428021 BRF1Q92994 677 aa19.31■□□□□ 0.68
VRK2-204ENST00000428021 RMDN3Q96TC7 470 aa19.31■□□□□ 0.68
VRK2-204ENST00000428021 TM6SF1Q9BZW5 370 aa19.31■□□□□ 0.68
VRK2-204ENST00000428021 RBM28Q9NW13 759 aaKnown RBP19.31■□□□□ 0.68
VRK2-204ENST00000428021 MAP3K20Q9NYL2 800 aaKnown RBP19.31■□□□□ 0.68
VRK2-204ENST00000428021 hCG_1642624A0A1W2PR95 340 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 CST5P28325 142 aaPredicted RBP19.3■□□□□ 0.68
VRK2-204ENST00000428021 CDC27P30260 824 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 ATN1P54259 1190 aaPredicted RBP19.3■□□□□ 0.68
VRK2-204ENST00000428021 FGD1P98174 961 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 RUFY3Q7L099 469 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 C7orf61Q8IZ16 206 aa19.3■□□□□ 0.68
VRK2-204ENST00000428021 FERMT2Q96AC1 680 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms