RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
VARS2-203ENST00000428017 GABRQQ9UN88 632 aa17.42■□□□□ 0.38
VARS2-203ENST00000428017 COL11A1P12107 1806 aaPredicted RBP17.42■□□□□ 0.38
VARS2-203ENST00000428017 SMCO2A6NFE2 343 aa17.41■□□□□ 0.38
VARS2-203ENST00000428017 DTNBO60941 627 aa17.41■□□□□ 0.38
VARS2-203ENST00000428017 GNA11P29992 359 aa17.41■□□□□ 0.38
VARS2-203ENST00000428017 NLRP5P59047 1200 aa17.41■□□□□ 0.38
VARS2-203ENST00000428017 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
VARS2-203ENST00000428017 PKN2Q16513 984 aaKnown RBP17.41■□□□□ 0.38
VARS2-203ENST00000428017 SLC30A10Q6XR72 485 aa17.41■□□□□ 0.38
VARS2-203ENST00000428017 TRMT44Q8IYL2 757 aaKnown RBP17.41■□□□□ 0.38
VARS2-203ENST00000428017 MPHOSPH6Q99547 160 aaKnown RBP17.41■□□□□ 0.38
VARS2-203ENST00000428017 VPS54Q9P1Q0 977 aa17.41■□□□□ 0.38
VARS2-203ENST00000428017 ADD3Q9UEY8 706 aaKnown RBP17.41■□□□□ 0.38
VARS2-203ENST00000428017 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
VARS2-203ENST00000428017 DIS3Q9Y2L1 958 aaKnown RBP17.41■□□□□ 0.38
VARS2-203ENST00000428017 COBLO75128 1261 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 HOXC6P09630 235 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 XRCC5P13010 732 aaKnown RBP17.4■□□□□ 0.38
VARS2-203ENST00000428017 HOXA13P31271 388 aaPredicted RBP17.4■□□□□ 0.38
VARS2-203ENST00000428017 HSD17B4P51659 736 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 IRF5Q13568 498 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 BECN1Q14457 450 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 TEX2Q8IWB9 1127 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 FAM177A1Q8N128 213 aaPredicted RBP17.4■□□□□ 0.38
VARS2-203ENST00000428017 BICD2Q8TD16 824 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 USP6NLQ92738 828 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 RIC8AQ9NPQ8 531 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
VARS2-203ENST00000428017 DNAJC25-GNG10A0A024R161 153 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 ESYT2A0FGR8 921 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 B4DLN1 442 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 OPLAHO14841 1288 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 ADCY3O60266 1144 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 FDPSP14324 419 aaKnown RBP17.39■□□□□ 0.37
VARS2-203ENST00000428017 CUL4AQ13619 759 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 ZNF792Q3KQV3 632 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 FCHSD1Q86WN1 690 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 SYTL5Q8TDW5 730 aaPredicted RBP17.39■□□□□ 0.37
VARS2-203ENST00000428017 TBC1D5Q92609 795 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 AIFM3Q96NN9 605 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 PTCH2Q9Y6C5 1203 aa17.39■□□□□ 0.37
VARS2-203ENST00000428017 SPDYE3A6NKU9 549 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 PIK3CDO00329 1044 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 CNTN2Q02246 1040 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 GHRHRQ02643 423 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 MFSD14CQ5VZR4 134 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 GALNT17Q6IS24 598 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 TYW1BQ6NUM6 668 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 FBXO46Q6PJ61 603 aaPredicted RBP17.38■□□□□ 0.37
VARS2-203ENST00000428017 USP17L6PQ6QN14 398 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 FAM133AQ8N9E0 248 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 SLAIN1Q8ND83 568 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 DNERQ8NFT8 737 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 NPLOC4Q8TAT6 608 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 ZMYND12Q9H0C1 365 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 EHMT1Q9H9B1 1298 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 BRMS1Q9HCU9 246 aa17.38■□□□□ 0.37
VARS2-203ENST00000428017 BIN2Q9UBW5 565 aaPredicted RBP17.38■□□□□ 0.37
VARS2-203ENST00000428017 ASB14A6NK59 587 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 GJB2P29033 226 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 FOSBP53539 338 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 UBE2SQ16763 222 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 ARHGEF16Q5VV41 709 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 ZNF467Q7Z7K2 595 aaPredicted RBP17.37■□□□□ 0.37
VARS2-203ENST00000428017 REXO1Q8N1G1 1221 aaKnown RBP17.37■□□□□ 0.37
VARS2-203ENST00000428017 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
VARS2-203ENST00000428017 PXYLP1Q8TE99 480 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 NSUN6Q8TEA1 469 aaKnown RBP17.37■□□□□ 0.37
VARS2-203ENST00000428017 INTS4Q96HW7 963 aaKnown RBP17.37■□□□□ 0.37
VARS2-203ENST00000428017 MAML3Q96JK9 1138 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 C8orf76Q96K31 380 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 RMDN3Q96TC7 470 aa17.37■□□□□ 0.37
VARS2-203ENST00000428017 BAZ2BQ9UIF8 2168 aaKnown RBP17.37■□□□□ 0.37
VARS2-203ENST00000428017 PCNTO95613 3336 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 SOWAHBA6NEL2 793 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 MEIS2O14770 477 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 FOSP01100 380 aaPredicted RBP17.36■□□□□ 0.37
VARS2-203ENST00000428017 ELNP15502 786 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 GRK4P32298 578 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
VARS2-203ENST00000428017 SAFBQ15424 915 aaKnown RBP eCLIP17.36■□□□□ 0.37
VARS2-203ENST00000428017 CCL14Q16627 93 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 SLC9C1Q4G0N8 1177 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 OLFML2BQ68BL8 750 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 TAAR1Q96RJ0 339 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 KCNJ14Q9UNX9 436 aa17.36■□□□□ 0.37
VARS2-203ENST00000428017 LOC102724159A0A0B4J2E5 919 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 HMGCRP04035 888 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 ALDH5A1P51649 535 aaPredicted RBP17.35■□□□□ 0.37
VARS2-203ENST00000428017 PDE4DQ08499 809 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 AP3B2Q13367 1082 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 PWP2Q15269 919 aaKnown RBP17.35■□□□□ 0.37
VARS2-203ENST00000428017 PURBQ96QR8 312 aaKnown RBP17.35■□□□□ 0.37
VARS2-203ENST00000428017 TINF2Q9BSI4 451 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 PHF20Q9BVI0 1012 aa17.35■□□□□ 0.37
VARS2-203ENST00000428017 COL20A1Q9P218 1284 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms