RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PWP2Q15269 919 aaKnown RBP21.47■■□□□ 1.03
GPC1-205ENST00000427506 BMP2KLQ5H9B9 411 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 TMEM67Q5HYA8 995 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 TAPT1Q6NXT6 567 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 TLK2Q86UE8 772 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 LSG1Q9H089 658 aaKnown RBP21.47■■□□□ 1.03
GPC1-205ENST00000427506 ANO2Q9NQ90 1003 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 PDLIM7Q9NR12 457 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 MAD2L2Q9UI95 211 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 MRPL11Q9Y3B7 192 aaKnown RBP21.47■■□□□ 1.03
GPC1-205ENST00000427506 TRIOBPQ9H2D6 2365 aa21.47■■□□□ 1.03
GPC1-205ENST00000427506 DYNC1LI2O43237 492 aaPredicted RBP21.46■■□□□ 1.03
GPC1-205ENST00000427506 CLTBP09497 229 aa21.46■■□□□ 1.03
GPC1-205ENST00000427506 MCF2L2Q86YR7 1114 aa21.46■■□□□ 1.03
GPC1-205ENST00000427506 RGS22Q8NE09 1264 aa21.46■■□□□ 1.03
GPC1-205ENST00000427506 DNERQ8NFT8 737 aa21.46■■□□□ 1.03
GPC1-205ENST00000427506 CCDC136Q96JN2 1154 aa21.46■■□□□ 1.03
GPC1-205ENST00000427506 GNEQ9Y223 722 aaKnown RBP21.46■■□□□ 1.03
GPC1-205ENST00000427506 DCDC2CA8MYV0 355 aa21.45■■□□□ 1.02
GPC1-205ENST00000427506 SH3RF1Q7Z6J0 888 aa21.45■■□□□ 1.02
GPC1-205ENST00000427506 CATIPQ7Z7H3 387 aa21.45■■□□□ 1.02
GPC1-205ENST00000427506 AMNQ9BXJ7 453 aa21.45■■□□□ 1.02
GPC1-205ENST00000427506 SENP2Q9HC62 589 aa21.45■■□□□ 1.02
GPC1-205ENST00000427506 ELP1O95163 1332 aa21.45■■□□□ 1.02
GPC1-205ENST00000427506 TRIM43BA6NCK2 446 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 PALM3A6NDB9 673 aaPredicted RBP21.44■■□□□ 1.02
GPC1-205ENST00000427506 ZEB2O60315 1214 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 GRM4Q14833 912 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 FSCN1Q16658 493 aaKnown RBP21.44■■□□□ 1.02
GPC1-205ENST00000427506 CASC1Q6TDU7 716 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 MB21D2Q8IYB1 491 aaPredicted RBP21.44■■□□□ 1.02
GPC1-205ENST00000427506 TBC1D5Q92609 795 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 TRIM43Q96BQ3 446 aaPredicted RBP21.44■■□□□ 1.02
GPC1-205ENST00000427506 WDR11Q9BZH6 1224 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 MAF1Q9H063 256 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 TMEM39AQ9NV64 488 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 Q9Y3F1 56 aa21.44■■□□□ 1.02
GPC1-205ENST00000427506 LCTP09848 1927 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 A0A0U1RQG5 324 aaPredicted RBP21.43■■□□□ 1.02
GPC1-205ENST00000427506 SOX1O00570 391 aaPredicted RBP21.43■■□□□ 1.02
GPC1-205ENST00000427506 SLC27A2O14975 620 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 CTAGE5O15320 804 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 PTGS1P23219 599 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 ANTXR2P58335 489 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 NKX3-2P78367 333 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 TMEM63BQ5T3F8 832 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 HOMER1Q86YM7 354 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 BADQ92934 168 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 LRRC37A2A6NM11 1700 aa21.43■■□□□ 1.02
GPC1-205ENST00000427506 ZBTB5O15062 677 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 PRC1O43663 620 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 RAG1P15918 1043 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 DUSP28Q4G0W2 176 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 CREB3L3Q68CJ9 461 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 MROH7Q68CQ1 1323 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 CXCL17Q6UXB2 119 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 ANKRD33Q7Z3H0 272 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 SYTL5Q8TDW5 730 aaPredicted RBP21.42■■□□□ 1.02
GPC1-205ENST00000427506 IGDCC4Q8TDY8 1250 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 LRCH3Q96II8 777 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 TOX2Q96NM4 488 aa21.42■■□□□ 1.02
GPC1-205ENST00000427506 CFBP00751 764 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 EDNRBP24530 442 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 MCM5P33992 734 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 FAAP100Q0VG06 881 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 TROAPQ12815 778 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 LRIT3Q3SXY7 679 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 NFXL1Q6ZNB6 911 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 NSUN6Q8TEA1 469 aaKnown RBP21.41■■□□□ 1.02
GPC1-205ENST00000427506 TAAR1Q96RJ0 339 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 PCDHA1Q9Y5I3 950 aa21.41■■□□□ 1.02
GPC1-205ENST00000427506 RBM47A0AV96 593 aaKnown RBP21.4■■□□□ 1.02
GPC1-205ENST00000427506 ARVCFO00192 962 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 CABYRO75952 493 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 TRAF1Q13077 416 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 PPP2R5BQ15173 497 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 NECTIN1Q15223 517 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 ARHGEF16Q5VV41 709 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 OR6J1Q8NGC5 347 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 SCFD2Q8WU76 684 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 MTMR8Q96EF0 704 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 PIGSQ96S52 555 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 RMDN3Q96TC7 470 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 RIOX1Q9H6W3 641 aa21.4■■□□□ 1.02
GPC1-205ENST00000427506 CCDC69A6NI79 296 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 KIAA0355O15063 1070 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 TLR3O15455 904 aaKnown RBP21.39■■□□□ 1.01
GPC1-205ENST00000427506 CDC45O75419 566 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 NEFLP07196 543 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 CDK7P50613 346 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 RNF20Q5VTR2 975 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 CTCFLQ8NI51 663 aaPredicted RBP21.39■■□□□ 1.01
GPC1-205ENST00000427506 TMEM87BQ96K49 555 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 MTA3Q9BTC8 594 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 LY9Q9HBG7 655 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 GPHNQ9NQX3 736 aaPredicted RBP21.39■■□□□ 1.01
GPC1-205ENST00000427506 COL20A1Q9P218 1284 aa21.39■■□□□ 1.01
GPC1-205ENST00000427506 NKRFO15226 690 aaKnown RBP eCLIP21.38■■□□□ 1.01
GPC1-205ENST00000427506 PPP1R11O60927 126 aaPredicted RBP21.38■■□□□ 1.01
GPC1-205ENST00000427506 TXNP10599 105 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms