RNA–Protein interactions for RNA: ENST00000425938.5

SLC6A1-202, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-202ENST00000425938 EEPD1Q7L9B9 569 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 FBXO16Q8IX29 292 aaPredicted RBP20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 DNERQ8NFT8 737 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 MORC4Q8TE76 937 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 NUP133Q8WUM0 1156 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 LY9Q9HBG7 655 aa20.33■□□□□ 0.85
SLC6A1-202ENST00000425938 MOXD2PA6NHM9 499 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 ZBTB5O15062 677 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 DDAH1O94760 285 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 SNX17Q15036 470 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 ZNF654Q8IZM8 581 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 PCSK9Q8NBP7 692 aaKnown RBP20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 KLHDC9Q8NEP7 349 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 CTCFLQ8NI51 663 aaPredicted RBP20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 PPP4R2Q9NY27 417 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 ATP11BQ9Y2G3 1177 aa20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 DDX49Q9Y6V7 483 aaKnown RBP20.32■□□□□ 0.84
SLC6A1-202ENST00000425938 CCDC69A6NI79 296 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 SH2B2O14492 632 aaPredicted RBP20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 ADCY6O43306 1168 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 CST5P28325 142 aaPredicted RBP20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 KIF5BP33176 963 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 ACLYP53396 1101 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 GJA9P57773 515 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 PDE4DQ08499 809 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 C1orf53Q5VUE5 145 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 IQSEC1Q6DN90 963 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 HOMER1Q86YM7 354 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 MTMR8Q96EF0 704 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 MAP3K14Q99558 947 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 UBE2OQ9C0C9 1292 aaKnown RBP20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 UPF3AQ9H1J1 476 aaKnown RBP20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 PRKAG2Q9UGJ0 569 aa20.31■□□□□ 0.84
SLC6A1-202ENST00000425938 SZT2Q5T011 3432 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 A0A1W2PQ45 241 aaPredicted RBP20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 A0A1W2PQY0 241 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 LIFRP42702 1097 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 KCNA10Q16322 511 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 GNASQ5JWF2 1037 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 AP5M1Q9H0R1 490 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 RIOX1Q9H6W3 641 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 GPHNQ9NQX3 736 aaPredicted RBP20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 PCDHA1Q9Y5I3 950 aa20.3■□□□□ 0.84
SLC6A1-202ENST00000425938 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 MYADML2A6NDP7 307 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 CALM1P0DP23 149 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 CALM2P0DP24 149 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 CALM3P0DP25 149 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 MDM2Q00987 491 aaPredicted RBP20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 KRT32Q14532 448 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 TRIM60Q495X7 471 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 TAPT1Q6NXT6 567 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 TLK2Q86UE8 772 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 TDHQ8IZJ6 230 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 GLT1D1Q96MS3 346 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 NEK1Q96PY6 1258 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 LBHD1Q9BQE6 289 aaPredicted RBP20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 STARD7Q9NQZ5 370 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 PDGFCQ9NRA1 345 aa20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 GNEQ9Y223 722 aaKnown RBP20.29■□□□□ 0.84
SLC6A1-202ENST00000425938 SMPD1P17405 629 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 GNAQP50148 359 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 CCSAPQ6IQ19 270 aaPredicted RBP20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 SYTL5Q8TDW5 730 aaPredicted RBP20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 NSUN6Q8TEA1 469 aaKnown RBP20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 TBC1D5Q92609 795 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 PIGSQ96S52 555 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 LZTS2Q9BRK4 669 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 MYL10Q9BUA6 226 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 Q9Y3F1 56 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 SLC12A7Q9Y666 1083 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 LAMA3Q16787 3333 aa20.28■□□□□ 0.84
SLC6A1-202ENST00000425938 PNMA6FA0A0J9YX94 578 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 DYNC1LI2O43237 492 aaPredicted RBP20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 CYTH3O43739 400 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 REC8O95072 547 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 CFBP00751 764 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 ASGR1P07306 291 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 EDNRBP24530 442 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 NKX3-2P78367 333 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 TSGA10IPQ3SY00 556 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 LRRC2Q9BYS8 371 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 WDR11Q9BZH6 1224 aa20.27■□□□□ 0.84
SLC6A1-202ENST00000425938 SOX1O00570 391 aaPredicted RBP20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 ZEB2O60315 1214 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 PPP1R11O60927 126 aaPredicted RBP20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 SMARCA1P28370 1054 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 FSCN1Q16658 493 aaKnown RBP20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 SLC35G1Q2M3R5 365 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 LRIT3Q3SXY7 679 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 DUSP28Q4G0W2 176 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 SYNE3Q6ZMZ3 975 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 DHX32Q7L7V1 743 aaKnown RBP20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 SAMD3Q8N6K7 520 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 VTI1AQ96AJ9 217 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 IWS1Q96ST2 819 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 RMDN3Q96TC7 470 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 SPZ1Q9BXG8 430 aa20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 PRDM5Q9NQX1 630 aaPredicted RBP20.26■□□□□ 0.83
SLC6A1-202ENST00000425938 MAP3K20Q9NYL2 800 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms