RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
TMEM248-204ENST00000424964 PHKBQ93100 1093 aa17.11■□□□□ 0.33
TMEM248-204ENST00000424964 MAF1Q9H063 256 aa17.11■□□□□ 0.33
TMEM248-204ENST00000424964 ADD3Q9UEY8 706 aaKnown RBP17.11■□□□□ 0.33
TMEM248-204ENST00000424964 RPTORQ8N122 1335 aa17.11■□□□□ 0.33
TMEM248-204ENST00000424964 HTTP42858 3142 aa17.11■□□□□ 0.33
TMEM248-204ENST00000424964 MCM3APO60318 1980 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 PPFIA3O75145 1194 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 CAPN15O75808 1086 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 CNGA1P29973 690 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 NTRK3Q16288 839 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 MAP3K21Q5TCX8 1036 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 MSL3Q8N5Y2 521 aaKnown RBP17.1■□□□□ 0.33
TMEM248-204ENST00000424964 GPKOWQ92917 476 aaPredicted RBP eCLIP17.1■□□□□ 0.33
TMEM248-204ENST00000424964 FGD4Q96M96 766 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
TMEM248-204ENST00000424964 ASB14A6NK59 587 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 GCOM1H8Y6P7 765 aaPredicted RBP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 OPLAHO14841 1288 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 PRPF3O43395 683 aaKnown RBP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 PFKFB2O60825 505 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 IGHA2P01877 340 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 POLR2MP0CAP2 368 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 IFNAR1P17181 557 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 CCND3P30281 292 aaPredicted RBP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 SSRP1Q08945 709 aaKnown RBP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 SCRN1Q12765 414 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 MAMDC4Q6UXC1 1216 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 SYTL5Q8TDW5 730 aaPredicted RBP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 RBM27Q9P2N5 1060 aaKnown RBP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 LIMCH1Q9UPQ0 1083 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 CNPY2Q9Y2B0 182 aa17.09■□□□□ 0.33
TMEM248-204ENST00000424964 KIAA0100Q14667 2235 aaKnown RBP17.09■□□□□ 0.33
TMEM248-204ENST00000424964 CENPFP49454 3210 aa17.08■□□□□ 0.33
TMEM248-204ENST00000424964 RBBP6Q7Z6E9 1792 aaKnown RBP17.08■□□□□ 0.33
TMEM248-204ENST00000424964 SYNGAP1Q96PV0 1343 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 HOXA13P31271 388 aaPredicted RBP17.08■□□□□ 0.32
TMEM248-204ENST00000424964 ALDH5A1P51649 535 aaPredicted RBP17.08■□□□□ 0.32
TMEM248-204ENST00000424964 HSD17B4P51659 736 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 NAPAP54920 295 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 SOX10P56693 466 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 ME3Q16798 604 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 WWC2Q6AWC2 1192 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 ARMCX2Q7L311 632 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 DNERQ8NFT8 737 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 CUL5Q93034 780 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 TAAR1Q96RJ0 339 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
TMEM248-204ENST00000424964 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.08■□□□□ 0.32
TMEM248-204ENST00000424964 MAP3K20Q9NYL2 800 aaKnown RBP17.08■□□□□ 0.32
TMEM248-204ENST00000424964 LCTP09848 1927 aa17.08■□□□□ 0.32
TMEM248-204ENST00000424964 ASTN1O14525 1302 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 B4DLN1 442 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 ST18O60284 1047 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 LARGE1O95461 756 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 SNAI1O95863 264 aaPredicted RBP17.07■□□□□ 0.32
TMEM248-204ENST00000424964 GJB1P08034 283 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 SCG2P13521 617 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 MRPL12P52815 198 aaKnown RBP17.07■□□□□ 0.32
TMEM248-204ENST00000424964 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
TMEM248-204ENST00000424964 FCHSD1Q86WN1 690 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 TRPV1Q8NER1 839 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 DEFB118Q96PH6 123 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 RMDN3Q96TC7 470 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 MPHOSPH6Q99547 160 aaKnown RBP17.07■□□□□ 0.32
TMEM248-204ENST00000424964 PSTPIP2Q9H939 334 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 COL20A1Q9P218 1284 aa17.07■□□□□ 0.32
TMEM248-204ENST00000424964 POTEFA5A3E0 1075 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 CDKL5O76039 1030 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 CYBAP13498 195 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 GHRHRQ02643 423 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 ARHGEF16Q5VV41 709 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 SMARCC2Q8TAQ2 1214 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 NSUN6Q8TEA1 469 aaKnown RBP17.06■□□□□ 0.32
TMEM248-204ENST00000424964 ABHD16BQ9H3Z7 469 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 PAK6Q9NQU5 681 aaPredicted RBP17.06■□□□□ 0.32
TMEM248-204ENST00000424964 BARHL2Q9NY43 387 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 NRBP1Q9UHY1 535 aa17.06■□□□□ 0.32
TMEM248-204ENST00000424964 ZHX1Q9UKY1 873 aaPredicted RBP17.06■□□□□ 0.32
TMEM248-204ENST00000424964 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
TMEM248-204ENST00000424964 LOC102724159A0A0B4J2E5 919 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 hCG_1984214I3L0E3 225 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 STXBP3O00186 592 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 TFRCP02786 760 aaKnown RBP17.05■□□□□ 0.32
TMEM248-204ENST00000424964 PDE4DQ08499 809 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 ACVR2BQ13705 512 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 PWP2Q15269 919 aaKnown RBP17.05■□□□□ 0.32
TMEM248-204ENST00000424964 PKN1Q16512 942 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 USP17L6PQ6QN14 398 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 EEPD1Q7L9B9 569 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 ZNF713Q8N859 430 aaPredicted RBP17.05■□□□□ 0.32
TMEM248-204ENST00000424964 GTF3C6Q969F1 213 aa17.05■□□□□ 0.32
TMEM248-204ENST00000424964 ZSCAN31Q96LW9 406 aaPredicted RBP17.05■□□□□ 0.32
TMEM248-204ENST00000424964 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
TMEM248-204ENST00000424964 SGPL1O95470 568 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms