RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TCERG1O14776 1098 aaKnown RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 UBOX5O94941 541 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 KRT1P04264 644 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 CFPP27918 469 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 CASP2P42575 452 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 TRAPPC10P48553 1259 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 NASPP49321 788 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 CDKN1CP49918 316 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 CHRNEQ04844 493 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 CLCQ05315 142 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 TTF1Q15361 905 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 TCEA2Q15560 299 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 GRAMD1BQ3KR37 738 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 TIGD5Q53EQ6 642 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 FBLN7Q53RD9 439 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 GK5Q6ZS86 529 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 C1QL4Q86Z23 238 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 IRF2BP1Q8IU81 584 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 RAVER1Q8IY67 606 aaKnown RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 LRRC56Q8IYG6 542 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 IFNL3Q8IZI9 196 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 ANKS4BQ8N8V4 417 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 C1orf131Q8NDD1 294 aaKnown RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 ZSCAN18Q8TBC5 510 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 HNRNPLLQ8WVV9 542 aaKnown RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 VWCEQ96DN2 955 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 EAF1Q96JC9 268 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 SLC26A8Q96RN1 970 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.62□□□□□ -1.67
SF3B1-205ENST00000424674 ANTXR1Q9H6X2 564 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 C19orf44Q9H6X5 657 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 PRKAG3Q9UGI9 489 aa4.62□□□□□ -1.67
SF3B1-205ENST00000424674 TCAF2A6NFQ2 919 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 KCNQ2O43526 872 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 TMEM253P0C7T8 217 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 VDRP11473 427 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 GLDCP23378 1020 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 POLR2BP30876 1174 aaKnown RBP4.61□□□□□ -1.67
SF3B1-205ENST00000424674 ETFBP38117 255 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 COL9A2Q14055 689 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-205ENST00000424674 TNNI3KQ59H18 835 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 RNF111Q6ZNA4 994 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 SPPL2CQ8IUH8 684 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 KIAA0825Q8IV33 1275 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 MYO1HQ8N1T3 1032 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 LILRB2Q8N423 598 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 ENOX1Q8TC92 643 aaKnown RBP4.61□□□□□ -1.67
SF3B1-205ENST00000424674 SYTL5Q8TDW5 730 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-205ENST00000424674 CHAC2Q8WUX2 184 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 DNAJC7Q99615 494 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 SPON2Q9BUD6 331 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 HDAC8Q9BY41 377 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.61□□□□□ -1.67
SF3B1-205ENST00000424674 KANSL2Q9H9L4 492 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 KCNK12Q9HB15 430 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 CD320Q9NPF0 282 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 GPR160Q9UJ42 338 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 MSRB2Q9Y3D2 182 aa4.61□□□□□ -1.67
SF3B1-205ENST00000424674 FAM86C2PA6NEL3 165 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 CCDC85CA6NKD9 419 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 RASGRP1O95267 797 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 SCGB1D2O95969 90 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 MED14OSP0DP75 135 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 APOBRQ0VD83 1088 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 MORC3Q14149 939 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 KCTD2Q14681 263 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 INO80DQ53TQ3 878 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-205ENST00000424674 C2orf27AQ580R0 203 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 ACBD5Q5T8D3 534 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-205ENST00000424674 CDCP2Q5VXM1 449 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 CCDC70Q6NSX1 233 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 ATG14Q6ZNE5 492 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 NLRC3Q7RTR2 1065 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 HDGFL2Q7Z4V5 671 aaPredicted RBP4.6□□□□□ -1.67
SF3B1-205ENST00000424674 JAMLQ86YT9 394 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 DAGLBQ8NCG7 672 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 NKD1Q969G9 470 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 INTS4Q96HW7 963 aaKnown RBP4.6□□□□□ -1.67
SF3B1-205ENST00000424674 CNNM2Q9H8M5 875 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 EHMT1Q9H9B1 1298 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 EBF1Q9UH73 591 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 INTUQ9ULD6 942 aa4.6□□□□□ -1.67
SF3B1-205ENST00000424674 YBX2Q9Y2T7 364 aaKnown RBP4.6□□□□□ -1.67
SF3B1-205ENST00000424674 GOLGA6CA6NDK9 693 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 GOLGA6BA6NDN3 693 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 NPIPB6E9PJ23 425 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 ETV2O00321 342 aaPredicted RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 CLEC3AO75596 197 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 LDHCP07864 332 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 MYL3P08590 195 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 GOLGA6DP0CG33 693 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 RPL10P27635 214 aaKnown RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 SOX5P35711 763 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 CCNFP41002 786 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 PCBP3P57721 371 aaKnown RBP4.59□□□□□ -1.67
SF3B1-205ENST00000424674 RASGRF1Q13972 1273 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 SNX17Q15036 470 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 KCNA10Q16322 511 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 NBPF9Q3BBW0 867 aa4.59□□□□□ -1.67
SF3B1-205ENST00000424674 ALFQ53S48 1182 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms