RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 CPVLQ9H3G5 476 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 RIPK3Q9Y572 518 aa13.54□□□□□ -0.24
LMO3-206ENST00000424192 POTEB2H3BUK9 544 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 CYTH3O43739 400 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 ST18O60284 1047 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 CDKL5O76039 1030 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 PLEKHA8P1O95397 391 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 CAPN2P17655 700 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 CYP2B6P20813 491 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 NEK4P51957 841 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 SNAP25P60880 206 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 USH1GQ495M9 461 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 PIGSQ96S52 555 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 A1CFQ9NQ94 594 aaKnown RBP13.53□□□□□ -0.24
LMO3-206ENST00000424192 MAP3K20Q9NYL2 800 aaKnown RBP13.53□□□□□ -0.24
LMO3-206ENST00000424192 BIN2Q9UBW5 565 aaPredicted RBP13.53□□□□□ -0.24
LMO3-206ENST00000424192 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
LMO3-206ENST00000424192 NRBP1Q9UHY1 535 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 METRNQ9UJH8 293 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 COLQQ9Y215 455 aaPredicted RBP13.53□□□□□ -0.24
LMO3-206ENST00000424192 PCDHA1Q9Y5I3 950 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
LMO3-206ENST00000424192 MYH6P13533 1939 aa13.52□□□□□ -0.24
LMO3-206ENST00000424192 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 B4DLN1 442 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 CPLX1O14810 134 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
LMO3-206ENST00000424192 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
LMO3-206ENST00000424192 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
LMO3-206ENST00000424192 AK2P54819 239 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.25
LMO3-206ENST00000424192 NSMFQ6X4W1 530 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 TRIM22Q8IYM9 498 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 SRBD1Q8N5C6 995 aaKnown RBP13.52□□□□□ -0.25
LMO3-206ENST00000424192 ABHD8Q96I13 439 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 ZNF333Q96JL9 665 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 CYP39A1Q9NYL5 469 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 SYNGAP1Q96PV0 1343 aa13.52□□□□□ -0.25
LMO3-206ENST00000424192 HTTP42858 3142 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 PTPDC1A2A3K4 754 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 INHAP05111 366 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 C7P10643 843 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 IFNAR1P17181 557 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 GHRHRQ02643 423 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 MUM1L1Q5H9M0 696 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 RNF207Q6ZRF8 634 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 RAB11FIP4Q86YS3 637 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 FAM177A1Q8N128 213 aaPredicted RBP13.51□□□□□ -0.25
LMO3-206ENST00000424192 CCDC12Q8WUD4 166 aaPredicted RBP13.51□□□□□ -0.25
LMO3-206ENST00000424192 TRIB2Q92519 343 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 RNF26Q9BY78 433 aaPredicted RBP13.51□□□□□ -0.25
LMO3-206ENST00000424192 GLT8D2Q9H1C3 349 aa13.51□□□□□ -0.25
LMO3-206ENST00000424192 SLKQ9H2G2 1235 aaPredicted RBP13.51□□□□□ -0.25
LMO3-206ENST00000424192 ASB14A6NK59 587 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 NFIBO00712 420 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 COBLO75128 1261 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 ELNP15502 786 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 SLC35G1Q2M3R5 365 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
LMO3-206ENST00000424192 FAM133AQ8N9E0 248 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 DNERQ8NFT8 737 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 SH3TC2Q8TF17 1288 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 CLEC4DQ8WXI8 215 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 CNPY2Q9Y2B0 182 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 PLXNA1Q9UIW2 1896 aa13.5□□□□□ -0.25
LMO3-206ENST00000424192 STK36Q9NRP7 1315 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 MSCO60682 206 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 PFKFB2O60825 505 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 PPP1R11O60927 126 aaPredicted RBP13.49□□□□□ -0.25
LMO3-206ENST00000424192 PGK2P07205 417 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 CDC27P30260 824 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 MCM2P49736 904 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 FUT2Q10981 343 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 MAP3K21Q5TCX8 1036 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 MAMDC4Q6UXC1 1216 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 HEATR3Q7Z4Q2 680 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 NPLOC4Q8TAT6 608 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 CUL5Q93034 780 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 ZSCAN31Q96LW9 406 aaPredicted RBP13.49□□□□□ -0.25
LMO3-206ENST00000424192 TINF2Q9BSI4 451 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
LMO3-206ENST00000424192 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
LMO3-206ENST00000424192 DOCK3Q8IZD9 2030 aa13.49□□□□□ -0.25
LMO3-206ENST00000424192 RPTORQ8N122 1335 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 GCOM1H8Y6P7 765 aaPredicted RBP13.48□□□□□ -0.25
LMO3-206ENST00000424192 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
LMO3-206ENST00000424192 POLR2MP0CAP2 368 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 SCG2P13521 617 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 ADD1P35611 737 aaKnown RBP13.48□□□□□ -0.25
LMO3-206ENST00000424192 HSD17B4P51659 736 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 RPS6P62753 249 aaKnown RBP13.48□□□□□ -0.25
LMO3-206ENST00000424192 BAATQ14032 418 aaPredicted RBP13.48□□□□□ -0.25
LMO3-206ENST00000424192 CCL14Q16627 93 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
LMO3-206ENST00000424192 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms