RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 RPS6P62753 249 aaKnown RBP19.62■□□□□ 0.73
CCDC78-203ENST00000423653 IRX5P78411 483 aaPredicted RBP19.62■□□□□ 0.73
CCDC78-203ENST00000423653 BEX3Q00994 111 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 PDE4DQ08499 809 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 SHHQ15465 462 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 USH1GQ495M9 461 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
CCDC78-203ENST00000423653 FAM109BQ6ICB4 259 aaPredicted RBP19.62■□□□□ 0.73
CCDC78-203ENST00000423653 TAPT1Q6NXT6 567 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 KIAA1211Q6ZU35 1233 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 Q7L0L9 218 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 SEZ6LQ9BYH1 1024 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 IL25Q9H293 177 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 TBX21Q9UL17 535 aa19.62■□□□□ 0.73
CCDC78-203ENST00000423653 DYNC1LI2O43237 492 aaPredicted RBP19.61■□□□□ 0.73
CCDC78-203ENST00000423653 DHX16O60231 1041 aaKnown RBP19.61■□□□□ 0.73
CCDC78-203ENST00000423653 CDK7P50613 346 aa19.61■□□□□ 0.73
CCDC78-203ENST00000423653 DUSP28Q4G0W2 176 aa19.61■□□□□ 0.73
CCDC78-203ENST00000423653 C9orf50Q5SZB4 431 aa19.61■□□□□ 0.73
CCDC78-203ENST00000423653 PURBQ96QR8 312 aaKnown RBP19.61■□□□□ 0.73
CCDC78-203ENST00000423653 UBA5Q9GZZ9 404 aa19.61■□□□□ 0.73
CCDC78-203ENST00000423653 PDGFCQ9NRA1 345 aa19.61■□□□□ 0.73
CCDC78-203ENST00000423653 DDX49Q9Y6V7 483 aaKnown RBP19.61■□□□□ 0.73
CCDC78-203ENST00000423653 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
CCDC78-203ENST00000423653 TIMP1P01033 207 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 ITGB8P26012 769 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 CHMLP26374 656 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 ZNF697Q5TEC3 545 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 CXCL17Q6UXB2 119 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 FAM126BQ8IXS8 530 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 ADGRF4Q8IZF3 695 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 RGS22Q8NE09 1264 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 RNPC3Q96LT9 517 aaKnown RBP19.6■□□□□ 0.73
CCDC78-203ENST00000423653 MTMR10Q9NXD2 777 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 MYH6P13533 1939 aa19.6■□□□□ 0.73
CCDC78-203ENST00000423653 PPP2R5BQ15173 497 aa19.59■□□□□ 0.73
CCDC78-203ENST00000423653 BRDTQ58F21 947 aaPredicted RBP19.59■□□□□ 0.73
CCDC78-203ENST00000423653 RALYLQ86SE5 291 aaKnown RBP19.59■□□□□ 0.73
CCDC78-203ENST00000423653 MCF2L2Q86YR7 1114 aa19.59■□□□□ 0.73
CCDC78-203ENST00000423653 SCFD2Q8WU76 684 aa19.59■□□□□ 0.73
CCDC78-203ENST00000423653 WDR11Q9BZH6 1224 aa19.59■□□□□ 0.73
CCDC78-203ENST00000423653 CPVLQ9H3G5 476 aa19.59■□□□□ 0.73
CCDC78-203ENST00000423653 ERICH2A1L162 156 aa19.58■□□□□ 0.72
CCDC78-203ENST00000423653 NKRFO15226 690 aaKnown RBP eCLIP19.58■□□□□ 0.72
CCDC78-203ENST00000423653 EDNRBP24530 442 aa19.58■□□□□ 0.72
CCDC78-203ENST00000423653 CPT1AP50416 773 aa19.58■□□□□ 0.72
CCDC78-203ENST00000423653 SMAD3P84022 425 aaKnown RBP19.58■□□□□ 0.72
CCDC78-203ENST00000423653 PPIGQ13427 754 aaKnown RBP eCLIP19.58■□□□□ 0.72
CCDC78-203ENST00000423653 SART3Q15020 963 aaKnown RBP19.58■□□□□ 0.72
CCDC78-203ENST00000423653 POLR3EQ9NVU0 708 aa19.58■□□□□ 0.72
CCDC78-203ENST00000423653 STXBP5LQ9Y2K9 1186 aa19.58■□□□□ 0.72
CCDC78-203ENST00000423653 MRPL11Q9Y3B7 192 aaKnown RBP19.58■□□□□ 0.72
CCDC78-203ENST00000423653 RBM47A0AV96 593 aaKnown RBP19.57■□□□□ 0.72
CCDC78-203ENST00000423653 ITGA7Q13683 1181 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 SEC23AQ15436 765 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 QRICH1Q2TAL8 776 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 MFSD5Q6N075 450 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 FBXO11Q86XK2 927 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 TMEM199Q8N511 208 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 SLC43A3Q8NBI5 491 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 OR6J1Q8NGC5 347 aa19.57■□□□□ 0.72
CCDC78-203ENST00000423653 SGSM2O43147 1006 aa19.56■□□□□ 0.72
CCDC78-203ENST00000423653 CYP21A2P08686 494 aa19.56■□□□□ 0.72
CCDC78-203ENST00000423653 LAMA2P24043 3122 aaKnown RBP19.55■□□□□ 0.72
CCDC78-203ENST00000423653 CD4P01730 458 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 PTGS1P23219 599 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 EPHB4P54760 987 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 PTH1RQ03431 593 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 CYB5R4Q7L1T6 521 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 NCOA7Q8NI08 942 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 NSUN6Q8TEA1 469 aaKnown RBP19.55■□□□□ 0.72
CCDC78-203ENST00000423653 AMNQ9BXJ7 453 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 JMJD4Q9H9V9 463 aa19.55■□□□□ 0.72
CCDC78-203ENST00000423653 GPHNQ9NQX3 736 aaPredicted RBP19.55■□□□□ 0.72
CCDC78-203ENST00000423653 KLRF2D3W0D1 207 aa19.54■□□□□ 0.72
CCDC78-203ENST00000423653 IFIT3O14879 490 aaKnown RBP19.54■□□□□ 0.72
CCDC78-203ENST00000423653 TRAF1Q13077 416 aa19.54■□□□□ 0.72
CCDC78-203ENST00000423653 TTLL4Q14679 1199 aa19.54■□□□□ 0.72
CCDC78-203ENST00000423653 PSRC1Q6PGN9 363 aaPredicted RBP19.54■□□□□ 0.72
CCDC78-203ENST00000423653 PPP1R12CQ9BZL4 782 aa19.54■□□□□ 0.72
CCDC78-203ENST00000423653 HIPK3Q9H422 1215 aa19.54■□□□□ 0.72
CCDC78-203ENST00000423653 VAT1LQ9HCJ6 419 aa19.54■□□□□ 0.72
CCDC78-203ENST00000423653 TMEM265A0A087WTH1 108 aa19.53■□□□□ 0.72
CCDC78-203ENST00000423653 KPNA6O60684 536 aa19.53■□□□□ 0.72
CCDC78-203ENST00000423653 WTAPQ15007 396 aa19.53■□□□□ 0.72
CCDC78-203ENST00000423653 TMEM63BQ5T3F8 832 aa19.53■□□□□ 0.72
CCDC78-203ENST00000423653 STAG2Q8N3U4 1231 aa19.53■□□□□ 0.72
CCDC78-203ENST00000423653 SYTL5Q8TDW5 730 aaPredicted RBP19.53■□□□□ 0.72
CCDC78-203ENST00000423653 IWS1Q96ST2 819 aa19.53■□□□□ 0.72
CCDC78-203ENST00000423653 COL6A3P12111 3177 aa19.52■□□□□ 0.72
CCDC78-203ENST00000423653 E7EWF7 191 aa19.52■□□□□ 0.72
CCDC78-203ENST00000423653 ZBTB5O15062 677 aa19.52■□□□□ 0.72
CCDC78-203ENST00000423653 MYL3P08590 195 aa19.52■□□□□ 0.72
CCDC78-203ENST00000423653 TXNP10599 105 aaKnown RBP19.52■□□□□ 0.72
CCDC78-203ENST00000423653 PSMC6P62333 389 aa19.52■□□□□ 0.72
CCDC78-203ENST00000423653 PURAQ00577 322 aaKnown RBP19.52■□□□□ 0.72
CCDC78-203ENST00000423653 SLC17A8Q8NDX2 589 aa19.52■□□□□ 0.72
CCDC78-203ENST00000423653 RMDN3Q96TC7 470 aa19.52■□□□□ 0.72
CCDC78-203ENST00000423653 MTG1Q9BT17 334 aaPredicted RBP19.52■□□□□ 0.72
CCDC78-203ENST00000423653 MTIF3Q9H2K0 278 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms