RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 FUBP3Q96I24 572 aaKnown RBP eCLIP4□□□□□ -1.776e-7■■■■□ 19.4
TOP2A-201ENST00000423485 SLC52A2Q9HAB3 445 aa4□□□□□ -1.77
TOP2A-201ENST00000423485 APOBEC2Q9Y235 224 aaKnown RBP4□□□□□ -1.77
TOP2A-201ENST00000423485 NEMP1O14524 444 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ST18O60284 1047 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PDE8BO95263 885 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CFIP05156 583 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 KCNA5P22460 613 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PPM1AP35813 382 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ALDH1A3P47895 512 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ANAPC15P60006 121 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ZNF827Q17R98 1081 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 LRP10Q7Z4F1 713 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SSH3Q8TE77 659 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 AFG1LQ8WV93 481 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 WASF1Q92558 559 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 BACH2Q9BYV9 841 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SOS2Q07890 1332 aaPredicted RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 A0A1W2PPC1 479 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 RNMTO43148 476 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 MTHFRP42898 656 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 IFNAR2P48551 515 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 GPSM2P81274 684 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC70Q6NSX1 233 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PDXDC1Q6P996 788 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CEP57Q86XR8 500 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 KIAA1143Q96AT1 154 aaPredicted RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PAWRQ96IZ0 340 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 COLEC11Q9BWP8 271 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 LSM7Q9UK45 103 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ZDHHC9Q9Y397 364 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 EMILIN1Q9Y6C2 1016 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PKD1L3Q7Z443 1732 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 COL15A1P39059 1388 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ZNF804BA4D1E1 1349 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC196A0A1B0GTZ2 297 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 DYNC1LI2O43237 492 aaPredicted RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PRKAR2AP13861 404 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CCND2P30279 289 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 AK2P54819 239 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CETN1Q12798 172 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CEP135Q66GS9 1140 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PRR23CQ6ZRP0 262 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SEPT14Q6ZU15 432 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 OTUD6AQ7L8S5 288 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 NOP9Q86U38 636 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ANKRD44Q8N8A2 993 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ADAMTS19Q8TE59 1207 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 WNK4Q96J92 1243 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SECISBP2Q96T21 854 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 STAP2Q9UGK3 403 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SEPT9Q9UHD8 586 aaPredicted RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 INPP5FQ9Y2H2 1132 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 KIF20BQ96Q89 1820 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 STRCQ7RTU9 1775 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 DTNBO60941 627 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SURF6O75683 361 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 MCAMP43121 646 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PDE1BQ01064 536 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PAK2Q13177 524 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 GPM6BQ13491 265 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 ARMC6Q6NXE6 501 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SETD7Q8WTS6 366 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 NECTIN4Q96NY8 510 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 MED10Q9BTT4 135 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SEMA4AQ9H3S1 761 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PANK3Q9H999 370 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 GPRC5DQ9NZD1 345 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CCPG1Q9ULG6 757 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PCDHA1Q9Y5I3 950 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 WDR81Q562E7 1941 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 NPC1L1Q9UHC9 1359 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 RSPH10B2B2RC85 870 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 BCAR3O75815 825 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 RSPH10BP0C881 870 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 DEKP35659 375 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 DHPSP49366 369 aaPredicted RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CENPCQ03188 943 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 PEX6Q13608 980 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 GIT2Q14161 759 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 NFIXQ14938 502 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SYCP3Q8IZU3 236 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 XAGE3Q8WTP9 111 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC17Q96LX7 622 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 GTPBP2Q9BX10 602 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 MRPL9Q9BYD2 267 aaKnown RBP3.99□□□□□ -1.77
TOP2A-201ENST00000423485 DEFB129Q9H1M3 183 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 SWAP70Q9UH65 585 aa3.99□□□□□ -1.77
TOP2A-201ENST00000423485 A0A1B0GUL7 405 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 AP1G2O75843 785 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 CDKL5O76039 1030 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 TPM1P09493 284 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 GNAT2P19087 354 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 RXRAP19793 462 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 ST3GAL1Q11201 340 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 C2orf27AQ580R0 203 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 FOXP4Q8IVH2 680 aaPredicted RBP3.98□□□□□ -1.77
TOP2A-201ENST00000423485 CCDC136Q96JN2 1154 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 SYNCQ9H7C4 482 aa3.98□□□□□ -1.77
TOP2A-201ENST00000423485 SLC12A6Q9UHW9 1150 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms