RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 MNAT1P51948 309 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 CDK17Q00537 523 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 CCDC181Q5TID7 509 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 EMBQ6PCB8 327 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 ALS2CLQ60I27 953 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 BLIDQ8IZY5 108 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 DHTKD1Q96HY7 919 aaPredicted RBP23.65■■□□□ 1.38
USP48-205ENST00000421625 RBM12Q9NTZ6 932 aaKnown RBP23.65■■□□□ 1.38
USP48-205ENST00000421625 SALL4Q9UJQ4 1053 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 HYOU1Q9Y4L1 999 aa23.65■■□□□ 1.38
USP48-205ENST00000421625 SLIT2O94813 1529 aa23.64■■□□□ 1.38
USP48-205ENST00000421625 CCNE1P24864 410 aa23.64■■□□□ 1.38
USP48-205ENST00000421625 UBA7P41226 1012 aa23.64■■□□□ 1.38
USP48-205ENST00000421625 KIF11P52732 1056 aa23.64■■□□□ 1.38
USP48-205ENST00000421625 ANKRD13CQ8N6S4 541 aa23.64■■□□□ 1.38
USP48-205ENST00000421625 RUBCNQ92622 972 aa23.64■■□□□ 1.38
USP48-205ENST00000421625 CAPN7Q9Y6W3 813 aa23.64■■□□□ 1.38
USP48-205ENST00000421625 CICQ96RK0 1608 aaPredicted RBP23.64■■□□□ 1.37
USP48-205ENST00000421625 EIF4A3P38919 411 aaKnown RBP23.64■■□□□ 1.37
USP48-205ENST00000421625 STK4Q13043 487 aa23.64■■□□□ 1.37
USP48-205ENST00000421625 CCDC178Q5BJE1 867 aa23.64■■□□□ 1.37
USP48-205ENST00000421625 ERGIC2Q96RQ1 377 aa23.64■■□□□ 1.37
USP48-205ENST00000421625 NUP98P52948 1817 aa23.64■■□□□ 1.37
USP48-205ENST00000421625 A0A1W2PQJ5 194 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 ZEB2O60315 1214 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 FCER1AP12319 257 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 PRLRP16471 622 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 NNTQ13423 1086 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 CAVIN3Q969G5 261 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 SLC4A9Q96Q91 983 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 PDE4DQ08499 809 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 C8orf74Q6P047 294 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 CNPY4Q8N129 248 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 MS4A14Q96JA4 679 aa23.63■■□□□ 1.37
USP48-205ENST00000421625 FAM207AQ9NSI2 230 aaPredicted RBP23.63■■□□□ 1.37
USP48-205ENST00000421625 DLEC1Q9Y238 1755 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 MYO1FO00160 1098 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 TCP1P17987 556 aaKnown RBP23.62■■□□□ 1.37
USP48-205ENST00000421625 HPS3Q969F9 1004 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 PLAGL2Q9UPG8 496 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 USP17L12C9JPN9 530 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 USP17L21D6R901 530 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 FAM153BP0C7A2 387 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 FAM153CQ494X1 144 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 ZSCAN29Q8IWY8 852 aaPredicted RBP23.62■■□□□ 1.37
USP48-205ENST00000421625 FAM153AQ9UHL3 310 aa23.62■■□□□ 1.37
USP48-205ENST00000421625 ZSCAN5CA6NGD5 496 aaPredicted RBP23.61■■□□□ 1.37
USP48-205ENST00000421625 CYP19A1P11511 503 aaPredicted RBP23.61■■□□□ 1.37
USP48-205ENST00000421625 FIGNQ5HY92 759 aa23.61■■□□□ 1.37
USP48-205ENST00000421625 RNPC3Q96LT9 517 aaKnown RBP23.61■■□□□ 1.37
USP48-205ENST00000421625 CCDC43Q96MW1 224 aaKnown RBP23.61■■□□□ 1.37
USP48-205ENST00000421625 ESYT3A0FGR9 886 aa23.61■■□□□ 1.37
USP48-205ENST00000421625 WTIPA6NIX2 430 aaPredicted RBP23.61■■□□□ 1.37
USP48-205ENST00000421625 APBA1Q02410 837 aa23.61■■□□□ 1.37
USP48-205ENST00000421625 CCDC91Q7Z6B0 441 aa23.61■■□□□ 1.37
USP48-205ENST00000421625 DZIP3Q86Y13 1208 aaKnown RBP23.61■■□□□ 1.37
USP48-205ENST00000421625 PRPF38AQ8NAV1 312 aaKnown RBP23.61■■□□□ 1.37
USP48-205ENST00000421625 ALS2CR12Q96Q35 445 aa23.61■■□□□ 1.37
USP48-205ENST00000421625 GLI1P08151 1106 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 FGRP09769 529 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 CARSP49589 748 aaKnown RBP23.6■■□□□ 1.37
USP48-205ENST00000421625 GUCY1A3Q02108 690 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 BICDL2A1A5D9 508 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 AKR1B10O60218 316 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 PLCG1P19174 1290 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 FNTAP49354 379 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 INF2Q27J81 1249 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 SUSD4Q5VX71 490 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 FAM114A1Q8IWE2 563 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 ZNF34Q8IZ26 560 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 TLR10Q9BXR5 811 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 NFU1Q9UMS0 254 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 PCDHA4Q9UN74 947 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 ZNF233A6NK53 670 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 CALML3P27482 149 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 HNRNPH3P31942 346 aaKnown RBP23.6■■□□□ 1.37
USP48-205ENST00000421625 PAFAH1B1P43034 410 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 GYG1P46976 350 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 BRIP1Q9BX63 1249 aa23.6■■□□□ 1.37
USP48-205ENST00000421625 BUB1O43683 1085 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 MYL1P05976 194 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 TNFRSF8P28908 595 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 ASIC1P78348 528 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 CHRNDQ07001 517 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 B4GALNT4Q76KP1 1039 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 OTUD6BQ8N6M0 293 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 MTMR8Q96EF0 704 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 CCSER1Q9C0I3 900 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 SIK3Q9Y2K2 1263 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 CCDC194A0A1B0GVG4 234 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 ZNF384Q8TF68 577 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 TRIM9Q9C026 710 aa23.59■■□□□ 1.37
USP48-205ENST00000421625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.59■■□□□ 1.37
USP48-205ENST00000421625 COL1A1P02452 1464 aaPredicted RBP23.58■■□□□ 1.37
USP48-205ENST00000421625 KIAA0754O94854 1291 aa23.58■■□□□ 1.37
USP48-205ENST00000421625 LSP1P33241 339 aa23.58■■□□□ 1.37
USP48-205ENST00000421625 ATP2B2Q01814 1243 aa23.58■■□□□ 1.37
USP48-205ENST00000421625 IFT81Q8WYA0 676 aa23.58■■□□□ 1.37
USP48-205ENST00000421625 FLT1P17948 1338 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms