RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 SYTL5Q8TDW5 730 aaPredicted RBP18.38■□□□□ 0.53
VAT1-202ENST00000420567 RRP36Q96EU6 259 aaKnown RBP18.38■□□□□ 0.53
VAT1-202ENST00000420567 KATNBL1Q9H079 304 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 C11orf49Q9H6J7 331 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 KIAA0100Q14667 2235 aaKnown RBP18.37■□□□□ 0.53
VAT1-202ENST00000420567 BRCA2P51587 3418 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 hCG_1642624A0A1W2PR95 340 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 CFBP00751 764 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 RARBP10826 455 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 RTN1Q16799 776 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 GJC2Q5T442 439 aaPredicted RBP18.37■□□□□ 0.53
VAT1-202ENST00000420567 NECAB2Q7Z6G3 386 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 RGS22Q8NE09 1264 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 UPF3BQ9BZI7 483 aaKnown RBP18.37■□□□□ 0.53
VAT1-202ENST00000420567 XPNPEP3Q9NQH7 507 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 COL20A1Q9P218 1284 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
VAT1-202ENST00000420567 FAM184BQ9ULE4 1060 aa18.37■□□□□ 0.53
VAT1-202ENST00000420567 ADCY6O43306 1168 aa18.36■□□□□ 0.53
VAT1-202ENST00000420567 SEC24BO95487 1268 aa18.36■□□□□ 0.53
VAT1-202ENST00000420567 SMARCA1P28370 1054 aa18.36■□□□□ 0.53
VAT1-202ENST00000420567 CCDC144BQ3MJ40 725 aa18.36■□□□□ 0.53
VAT1-202ENST00000420567 RUFY3Q7L099 469 aa18.36■□□□□ 0.53
VAT1-202ENST00000420567 TAAR1Q96RJ0 339 aa18.36■□□□□ 0.53
VAT1-202ENST00000420567 ZSWIM6Q9HCJ5 1215 aa18.36■□□□□ 0.53
VAT1-202ENST00000420567 RBM28Q9NW13 759 aaKnown RBP18.36■□□□□ 0.53
VAT1-202ENST00000420567 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.35■□□□□ 0.53
VAT1-202ENST00000420567 PGK1P00558 417 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 CDC27P30260 824 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 HOXA13P31271 388 aaPredicted RBP18.35■□□□□ 0.53
VAT1-202ENST00000420567 ADCYAP1R1P41586 468 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 METAP2P50579 478 aaKnown RBP eCLIP18.35■□□□□ 0.533e-7■■■□□ 16.6
VAT1-202ENST00000420567 MORC4Q8TE76 937 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 HTATIP2Q9BUP3 242 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 PDGFCQ9NRA1 345 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 CYP46A1Q9Y6A2 500 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 LCTP09848 1927 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
VAT1-202ENST00000420567 LRRC37A2A6NM11 1700 aa18.35■□□□□ 0.53
VAT1-202ENST00000420567 SYNRGQ9UMZ2 1314 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 DNM1LO00429 736 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 COL6A1P12109 1028 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 HSD17B4P51659 736 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 PDE4DQ08499 809 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 TRAF1Q13077 416 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 LRRC41Q15345 812 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 ARRDC4Q8NCT1 418 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 DNERQ8NFT8 737 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 DPF3Q92784 378 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 AGXT2Q9BYV1 514 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 TM6SF1Q9BZW5 370 aa18.34■□□□□ 0.53
VAT1-202ENST00000420567 FAM217BQ9NTX9 383 aaPredicted RBP18.34■□□□□ 0.53
VAT1-202ENST00000420567 FRMPD3Q5JV73 1810 aa18.33■□□□□ 0.53
VAT1-202ENST00000420567 KBTBD13C9JR72 458 aa18.33■□□□□ 0.52
VAT1-202ENST00000420567 EIF2AK2P19525 551 aaKnown RBP18.33■□□□□ 0.52
VAT1-202ENST00000420567 PTGS1P23219 599 aa18.33■□□□□ 0.52
VAT1-202ENST00000420567 GHRHRQ02643 423 aa18.33■□□□□ 0.52
VAT1-202ENST00000420567 TOB2Q14106 344 aaPredicted RBP18.33■□□□□ 0.52
VAT1-202ENST00000420567 TAPT1Q6NXT6 567 aa18.33■□□□□ 0.52
VAT1-202ENST00000420567 NOL8Q76FK4 1167 aaKnown RBP18.33■□□□□ 0.52
VAT1-202ENST00000420567 MPHOSPH6Q99547 160 aaKnown RBP18.33■□□□□ 0.52
VAT1-202ENST00000420567 MAF1Q9H063 256 aa18.33■□□□□ 0.52
VAT1-202ENST00000420567 VTA1Q9NP79 307 aa18.33■□□□□ 0.52
VAT1-202ENST00000420567 SMCHD1A6NHR9 2005 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 GCOM1H8Y6P7 765 aaPredicted RBP18.32■□□□□ 0.52
VAT1-202ENST00000420567 ADAMTS4O75173 837 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 POLR2MP0CAP2 368 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 SMPD1P17405 629 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 EDNRBP24530 442 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 RCAN1P53805 252 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 IRX5P78411 483 aaPredicted RBP18.32■□□□□ 0.52
VAT1-202ENST00000420567 TNFAIP2Q03169 654 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
VAT1-202ENST00000420567 C8orf34Q49A92 452 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 TMEM63BQ5T3F8 832 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 FBXL16Q8N461 479 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 NSUN6Q8TEA1 469 aaKnown RBP18.32■□□□□ 0.52
VAT1-202ENST00000420567 GPKOWQ92917 476 aaPredicted RBP eCLIP18.32■□□□□ 0.52
VAT1-202ENST00000420567 RMDN3Q96TC7 470 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 LARP6Q9BRS8 491 aaKnown RBP18.32■□□□□ 0.52
VAT1-202ENST00000420567 SENP6Q9GZR1 1112 aaPredicted RBP18.32■□□□□ 0.52
VAT1-202ENST00000420567 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
VAT1-202ENST00000420567 DUSP11O75319 330 aaKnown RBP18.31■□□□□ 0.52
VAT1-202ENST00000420567 ADD1P35611 737 aaKnown RBP18.31■□□□□ 0.52
VAT1-202ENST00000420567 FUT2Q10981 343 aa18.31■□□□□ 0.52
VAT1-202ENST00000420567 HEATR3Q7Z4Q2 680 aa18.31■□□□□ 0.52
VAT1-202ENST00000420567 RNF180Q86T96 592 aa18.31■□□□□ 0.52
VAT1-202ENST00000420567 FCHSD1Q86WN1 690 aa18.31■□□□□ 0.52
VAT1-202ENST00000420567 PXMP2Q9NR77 195 aa18.31■□□□□ 0.52
VAT1-202ENST00000420567 NID2Q14112 1375 aa18.3■□□□□ 0.52
VAT1-202ENST00000420567 B4DLN1 442 aa18.3■□□□□ 0.52
VAT1-202ENST00000420567 EIF5BO60841 1220 aaKnown RBP18.3■□□□□ 0.52
VAT1-202ENST00000420567 C6orf222P0C671 652 aaPredicted RBP18.3■□□□□ 0.52
VAT1-202ENST00000420567 MRPL12P52815 198 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms