RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
RARA-205ENST00000420042 RNPC3Q96LT9 517 aaKnown RBP17.69■□□□□ 0.42
RARA-205ENST00000420042 TNKSO95271 1327 aa17.69■□□□□ 0.42
RARA-205ENST00000420042 LAMA3Q16787 3333 aa17.69■□□□□ 0.42
RARA-205ENST00000420042 MCM3APO60318 1980 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 B4DLN1 442 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
RARA-205ENST00000420042 GSPT1P15170 499 aaKnown RBP17.68■□□□□ 0.42
RARA-205ENST00000420042 MRPL12P52815 198 aaKnown RBP17.68■□□□□ 0.42
RARA-205ENST00000420042 RPS6P62753 249 aaKnown RBP17.68■□□□□ 0.42
RARA-205ENST00000420042 PDE4DQ08499 809 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 ASPRV1Q53RT3 343 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 ZNF697Q5TEC3 545 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 ENAHQ8N8S7 591 aaPredicted RBP17.68■□□□□ 0.42
RARA-205ENST00000420042 WDR11Q9BZH6 1224 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 CPVLQ9H3G5 476 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 TBX21Q9UL17 535 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 STXBP5LQ9Y2K9 1186 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 RAD50Q92878 1312 aa17.68■□□□□ 0.42
RARA-205ENST00000420042 PARP1P09874 1014 aaKnown RBP17.67■□□□□ 0.42
RARA-205ENST00000420042 PTGS1P23219 599 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 EPHB4P54760 987 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 SMAD3P84022 425 aaKnown RBP17.67■□□□□ 0.42
RARA-205ENST00000420042 TRDNQ13061 729 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 ITGA7Q13683 1181 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 CDC37Q16543 378 aaPredicted RBP17.67■□□□□ 0.42
RARA-205ENST00000420042 DUSP28Q4G0W2 176 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
RARA-205ENST00000420042 MFSD5Q6N075 450 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 FAM126BQ8IXS8 530 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 ADGRF4Q8IZF3 695 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 DNERQ8NFT8 737 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 FAM161BQ96MY7 647 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 IL25Q9H293 177 aa17.67■□□□□ 0.42
RARA-205ENST00000420042 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
RARA-205ENST00000420042 TMEM199Q8N511 208 aa17.66■□□□□ 0.42
RARA-205ENST00000420042 RGS22Q8NE09 1264 aa17.66■□□□□ 0.42
RARA-205ENST00000420042 SEZ6LQ9BYH1 1024 aa17.66■□□□□ 0.42
RARA-205ENST00000420042 VAT1LQ9HCJ6 419 aa17.66■□□□□ 0.42
RARA-205ENST00000420042 ABCB11O95342 1321 aa17.66■□□□□ 0.42
RARA-205ENST00000420042 PPIGQ13427 754 aaKnown RBP eCLIP17.65■□□□□ 0.424e-7■□□□□ 11.3
RARA-205ENST00000420042 MCF2L2Q86YR7 1114 aa17.65■□□□□ 0.42
RARA-205ENST00000420042 SLC43A3Q8NBI5 491 aa17.65■□□□□ 0.42
RARA-205ENST00000420042 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
RARA-205ENST00000420042 MAF1Q9H063 256 aa17.65■□□□□ 0.42
RARA-205ENST00000420042 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
RARA-205ENST00000420042 LAMA4Q16363 1823 aa17.64■□□□□ 0.41
RARA-205ENST00000420042 RBM47A0AV96 593 aaKnown RBP17.64■□□□□ 0.41
RARA-205ENST00000420042 NKRFO15226 690 aaKnown RBP eCLIP17.64■□□□□ 0.41
RARA-205ENST00000420042 CD4P01730 458 aa17.64■□□□□ 0.41
RARA-205ENST00000420042 CHMLP26374 656 aa17.64■□□□□ 0.41
RARA-205ENST00000420042 CPT1AP50416 773 aa17.64■□□□□ 0.41
RARA-205ENST00000420042 PPP2R5BQ15173 497 aa17.64■□□□□ 0.41
RARA-205ENST00000420042 BRDTQ58F21 947 aaPredicted RBP17.64■□□□□ 0.41
RARA-205ENST00000420042 OR6J1Q8NGC5 347 aa17.64■□□□□ 0.41
RARA-205ENST00000420042 GPHNQ9NQX3 736 aaPredicted RBP17.64■□□□□ 0.41
RARA-205ENST00000420042 POLR3EQ9NVU0 708 aa17.64■□□□□ 0.41
RARA-205ENST00000420042 CSF2RAP15509 400 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 EDNRBP24530 442 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 PSMC6P62333 389 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 QRICH1Q2TAL8 776 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 FBXO11Q86XK2 927 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 SCFD2Q8WU76 684 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 GUCD1Q96NT3 240 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 MRPL11Q9Y3B7 192 aaKnown RBP17.63■□□□□ 0.41
RARA-205ENST00000420042 LRRC37A2A6NM11 1700 aa17.63■□□□□ 0.41
RARA-205ENST00000420042 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.62■□□□□ 0.41
RARA-205ENST00000420042 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.62■□□□□ 0.41
RARA-205ENST00000420042 ERICH2A1L162 156 aa17.62■□□□□ 0.41
RARA-205ENST00000420042 MYL3P08590 195 aa17.62■□□□□ 0.41
RARA-205ENST00000420042 TXNP10599 105 aaKnown RBP17.62■□□□□ 0.41
RARA-205ENST00000420042 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
RARA-205ENST00000420042 RALYLQ86SE5 291 aaKnown RBP17.62■□□□□ 0.41
RARA-205ENST00000420042 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.62■□□□□ 0.419e-6■■■■■ 27.7
RARA-205ENST00000420042 SEMA6BQ9H3T3 888 aa17.62■□□□□ 0.41
RARA-205ENST00000420042 HIPK3Q9H422 1215 aa17.62■□□□□ 0.41
RARA-205ENST00000420042 JMJD4Q9H9V9 463 aa17.62■□□□□ 0.41
RARA-205ENST00000420042 GRIN2DO15399 1336 aa17.62■□□□□ 0.41
RARA-205ENST00000420042 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 CYP21A2P08686 494 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 CYP2C18P33260 490 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 PURAQ00577 322 aaKnown RBP17.61■□□□□ 0.41
RARA-205ENST00000420042 PTH1RQ03431 593 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 TTLL4Q14679 1199 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 SEC23AQ15436 765 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 STAG2Q8N3U4 1231 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 SYTL5Q8TDW5 730 aaPredicted RBP17.61■□□□□ 0.41
RARA-205ENST00000420042 NSUN6Q8TEA1 469 aaKnown RBP17.61■□□□□ 0.41
RARA-205ENST00000420042 TBC1D5Q92609 795 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 AMNQ9BXJ7 453 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 TRPV6Q9H1D0 765 aa17.61■□□□□ 0.41
RARA-205ENST00000420042 LCTP09848 1927 aa17.6■□□□□ 0.41
RARA-205ENST00000420042 IFIT3O14879 490 aaKnown RBP17.6■□□□□ 0.41
RARA-205ENST00000420042 B4GALT4O60513 344 aa17.6■□□□□ 0.41
RARA-205ENST00000420042 SUPT20HL2P0C7V6 817 aa17.6■□□□□ 0.41
RARA-205ENST00000420042 SART3Q15020 963 aaKnown RBP17.6■□□□□ 0.41
RARA-205ENST00000420042 TMEM240Q5SV17 173 aa17.6■□□□□ 0.41
RARA-205ENST00000420042 PSRC1Q6PGN9 363 aaPredicted RBP17.6■□□□□ 0.41
RARA-205ENST00000420042 NCOA7Q8NI08 942 aa17.6■□□□□ 0.41
RARA-205ENST00000420042 TAAR1Q96RJ0 339 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms