RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 CCDC69A6NI79 296 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 KIF5BP33176 963 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 ADCYAP1R1P41586 468 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 KRT32Q14532 448 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 TAPT1Q6NXT6 567 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 NFXL1Q6ZNB6 911 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 EEPD1Q7L9B9 569 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 HOMER1Q86YM7 354 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 MCF2L2Q86YR7 1114 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 KLHDC9Q8NEP7 349 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 CTCFLQ8NI51 663 aaPredicted RBP23.6■■□□□ 1.37
GTF3A-202ENST00000419181 TBC1D5Q92609 795 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 PIGSQ96S52 555 aa23.6■■□□□ 1.37
GTF3A-202ENST00000419181 UPF3AQ9H1J1 476 aaKnown RBP23.6■■□□□ 1.37
GTF3A-202ENST00000419181 RANBP2P49792 3224 aaKnown RBP23.6■■□□□ 1.37
GTF3A-202ENST00000419181 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.59■■□□□ 1.37
GTF3A-202ENST00000419181 OPLAHO14841 1288 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 REC8O95072 547 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 EDNRBP24530 442 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 CST5P28325 142 aaPredicted RBP23.59■■□□□ 1.37
GTF3A-202ENST00000419181 ATN1P54259 1190 aaPredicted RBP23.59■■□□□ 1.37
GTF3A-202ENST00000419181 GJA9P57773 515 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 EXOSC10Q01780 885 aaKnown RBP23.59■■□□□ 1.37
GTF3A-202ENST00000419181 TNFAIP2Q03169 654 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 CCSAPQ6IQ19 270 aaPredicted RBP23.59■■□□□ 1.37
GTF3A-202ENST00000419181 SGMS1Q86VZ5 419 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 TSEN34Q9BSV6 310 aaKnown RBP23.59■■□□□ 1.37
GTF3A-202ENST00000419181 PDGFCQ9NRA1 345 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 PCDHA1Q9Y5I3 950 aa23.59■■□□□ 1.37
GTF3A-202ENST00000419181 MYADML2A6NDP7 307 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 HSPA4P34932 840 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 GHRHRQ02643 423 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 SNX17Q15036 470 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 SLC39A5Q6ZMH5 540 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 DHX32Q7L7V1 743 aaKnown RBP23.58■■□□□ 1.37
GTF3A-202ENST00000419181 SYTL5Q8TDW5 730 aaPredicted RBP23.58■■□□□ 1.37
GTF3A-202ENST00000419181 FERMT2Q96AC1 680 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 SPZ1Q9BXG8 430 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 COL20A1Q9P218 1284 aa23.58■■□□□ 1.37
GTF3A-202ENST00000419181 GNEQ9Y223 722 aaKnown RBP23.58■■□□□ 1.37
GTF3A-202ENST00000419181 PNMA6FA0A0J9YX94 578 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 C6orf222P0C671 652 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-202ENST00000419181 CALM1P0DP23 149 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 CALM2P0DP24 149 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 CALM3P0DP25 149 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 SMPD1P17405 629 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 SMARCA1P28370 1054 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 NKX3-2P78367 333 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 IRX5P78411 483 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-202ENST00000419181 TRAF1Q13077 416 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 IQSEC1Q6DN90 963 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 MPHOSPH6Q99547 160 aaKnown RBP23.57■■□□□ 1.36
GTF3A-202ENST00000419181 SPC25Q9HBM1 224 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 ZMYND8Q9ULU4 1186 aaPredicted RBP23.57■■□□□ 1.36
GTF3A-202ENST00000419181 SLC12A7Q9Y666 1083 aa23.57■■□□□ 1.36
GTF3A-202ENST00000419181 TRIOBPQ9H2D6 2365 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 A0A1W2PQ45 241 aaPredicted RBP23.56■■□□□ 1.36
GTF3A-202ENST00000419181 A0A1W2PQY0 241 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 CTAGE5O15320 804 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 RXRAP19793 462 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 HSD17B4P51659 736 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 ACLYP53396 1101 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 RTP1P59025 263 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 C1orf53Q5VUE5 145 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 TCEANC2Q96MN5 208 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 LZTS2Q9BRK4 669 aa23.56■■□□□ 1.36
GTF3A-202ENST00000419181 RBM27Q9P2N5 1060 aaKnown RBP23.56■■□□□ 1.36
GTF3A-202ENST00000419181 MOXD2PA6NHM9 499 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 PLEKHA8P1O95397 391 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 CFBP00751 764 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 HMGB1P09429 215 aaKnown RBP23.55■■□□□ 1.36
GTF3A-202ENST00000419181 GNAQP50148 359 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 PDE4DQ08499 809 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 KCNA10Q16322 511 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 NOL8Q76FK4 1167 aaKnown RBP23.55■■□□□ 1.36
GTF3A-202ENST00000419181 TLK2Q86UE8 772 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 TAAR1Q96RJ0 339 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 PRO3102Q9H379 93 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 SNX14Q9Y5W7 946 aa23.55■■□□□ 1.36
GTF3A-202ENST00000419181 RBM47A0AV96 593 aaKnown RBP23.54■■□□□ 1.36
GTF3A-202ENST00000419181 B4DLN1 442 aa23.54■■□□□ 1.36
GTF3A-202ENST00000419181 EPB41L2O43491 1005 aaKnown RBP23.54■■□□□ 1.36
GTF3A-202ENST00000419181 SYN1P17600 705 aa23.54■■□□□ 1.36
GTF3A-202ENST00000419181 MRPL12P52815 198 aaKnown RBP23.54■■□□□ 1.36
GTF3A-202ENST00000419181 TMEM63BQ5T3F8 832 aa23.54■■□□□ 1.36
GTF3A-202ENST00000419181 APOA5Q6Q788 366 aa23.54■■□□□ 1.36
GTF3A-202ENST00000419181 RAB11FIP4Q86YS3 637 aa23.54■■□□□ 1.36
GTF3A-202ENST00000419181 SRBD1Q8N5C6 995 aaKnown RBP23.54■■□□□ 1.36
GTF3A-202ENST00000419181 PCSK9Q8NBP7 692 aaKnown RBP23.54■■□□□ 1.36
GTF3A-202ENST00000419181 NSUN6Q8TEA1 469 aaKnown RBP23.54■■□□□ 1.36
GTF3A-202ENST00000419181 MAP3K20Q9NYL2 800 aaKnown RBP23.54■■□□□ 1.36
GTF3A-202ENST00000419181 Q9Y3F1 56 aa23.54■■□□□ 1.36
GTF3A-202ENST00000419181 PTGS1P23219 599 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 TRIM60Q495X7 471 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 DUSP28Q4G0W2 176 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 GNASQ5JWF2 1037 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 MICU3Q86XE3 530 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 SAMD3Q8N6K7 520 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 FANCBQ8NB91 859 aa23.53■■□□□ 1.36
GTF3A-202ENST00000419181 RRP36Q96EU6 259 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms