RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 SAP30BPQ9UHR5 308 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 CACNA1SQ13698 1873 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 ATP2B2Q01814 1243 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 FBXO33Q7Z6M2 555 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 FAM114A1Q8IWE2 563 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 CCSER1Q9C0I3 900 aa16.91■□□□□ 0.3
SEMA3B-203ENST00000419007 EIF3CLB5ME19 914 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 AKR1B10O60218 316 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 DNA2P51530 1060 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 NAP1L1P55209 391 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 RPS8P62241 208 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 TXNRD3Q86VQ6 643 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 NOC3LQ8WTT2 800 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 EIF3CQ99613 913 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 SMARCAL1Q9NZC9 954 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 MOCS3O95396 460 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 SLC7A5Q01650 507 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 SND1Q7KZF4 910 aaKnown RBP eCLIP16.9■□□□□ 0.32e-8■■■□□ 18.2
SEMA3B-203ENST00000419007 DYMQ7RTS9 669 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 RPGRIP1Q96KN7 1286 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 SH3GLB2Q9NR46 395 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 OR52Z1P0C646 297 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 GNAQP50148 359 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 SLC35G1Q2M3R5 365 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 CCDC170Q8IYT3 715 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 HDAC7Q8WUI4 952 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 TTYH3Q9C0H2 523 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 VIPAS39Q9H9C1 493 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 CAPN6Q9Y6Q1 641 aa16.9■□□□□ 0.3
SEMA3B-203ENST00000419007 GOLGA6BA6NDN3 693 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 TXKP42681 527 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 VAV2P52735 878 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 DIXDC1Q155Q3 683 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 CCDC181Q5TID7 509 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 IQCEQ6IPM2 695 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 DGKHQ86XP1 1220 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 KLRF2D3W0D1 207 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 STXBP3O00186 592 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 ZNF263O14978 683 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 TACC1O75410 805 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 DNAJC21Q5F1R6 531 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 CCNI2Q6ZMN8 369 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 AMOTL1Q8IY63 956 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 RETREG2Q8NC44 543 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 BARHL2Q9NY43 387 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 AFF2P51816 1311 aa16.89■□□□□ 0.29
SEMA3B-203ENST00000419007 MYL1P05976 194 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 GRM4Q14833 912 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 SH3RF3Q8TEJ3 882 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 TGFBRAP1Q8WUH2 860 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 TANGO6Q9C0B7 1094 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 SF3B3Q15393 1217 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 SBK1Q52WX2 424 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 MIIPQ5JXC2 388 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 C12orf60Q5U649 245 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 RRAGAQ7L523 313 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 LRRC1Q9BTT6 524 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 SPATA31A5Q5VU36 1347 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 SPATA31A7Q8IWB4 1347 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 TARSL2A2RTX5 802 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 EPHB6O15197 1021 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 EIF4A3P38919 411 aaKnown RBP16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 AARSP49588 968 aaKnown RBP eCLIP16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 NFRKBQ6P4R8 1299 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 ABCA3Q99758 1704 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 BIN2Q9UBW5 565 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 PCDHA13Q9Y5I0 950 aa16.88■□□□□ 0.29
SEMA3B-203ENST00000419007 ANO9A1A5B4 782 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 GOLGA6CA6NDK9 693 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 M0R2N6 131 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 KCNQ2O43526 872 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 GOLGA6DP0CG33 693 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 NONOQ15233 471 aaKnown RBP eCLIP16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 TRIM58Q8NG06 486 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 CALML4Q96GE6 196 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 TMEM47Q9BQJ4 181 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 GOLGA6AQ9NYA3 693 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 DMGDHQ9UI17 866 aaKnown RBP16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 MYH10P35580 1976 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 PRPF6O94906 941 aaKnown RBP16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 KIF11P52732 1056 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 AMPD3Q01432 767 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 SLC20A2Q08357 652 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 SOGA3Q5TF21 947 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 FAM76AQ8TAV0 307 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 CDK5RAP3Q96JB5 506 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 SNX12Q9UMY4 172 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 NCK2O43639 380 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 TTC19Q6DKK2 380 aaPredicted RBP16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 CNNM4Q6P4Q7 775 aa16.87■□□□□ 0.29
SEMA3B-203ENST00000419007 USP17L2Q6R6M4 530 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms