RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 FAM135BQ49AJ0 1406 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 SART1O43290 800 aaKnown RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 GSTA1P08263 222 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 GSTA2P09210 222 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 MYL7Q01449 175 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 RFX6Q8HWS3 928 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 EXOC4Q96A65 974 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 GGA1Q9UJY5 639 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 TRAPPC8Q9Y2L5 1435 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 UBXN2AP68543 259 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 FOXD4Q12950 439 aaPredicted RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 CUL4BQ13620 913 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 MMS19Q96T76 1030 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.14□□□□□ -0.31
UBR4-205ENST00000417040 SH3TC1Q8TE82 1336 aa13.14□□□□□ -0.31
UBR4-205ENST00000417040 CFAP43Q8NDM7 1665 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 EIF4A3P38919 411 aaKnown RBP13.13□□□□□ -0.31
UBR4-205ENST00000417040 NEK8Q86SG6 692 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 MROH5Q6ZUA9 1318 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 TESPA1A2RU30 521 aaPredicted RBP13.13□□□□□ -0.31
UBR4-205ENST00000417040 GGCXP38435 758 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 NR5A1Q13285 461 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 SLC39A14Q15043 492 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 MAP3K21Q5TCX8 1036 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 MED10Q9BTT4 135 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 PUS3Q9BZE2 481 aaKnown RBP13.13□□□□□ -0.31
UBR4-205ENST00000417040 KIAA1024Q9UPX6 916 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 PLAAQ9Y263 795 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 H7C0C1 242 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 PPP6R2O75170 966 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 ATP5OP48047 213 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 NME8Q8N427 588 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 ELAC2Q9BQ52 826 aaKnown RBP13.13□□□□□ -0.31
UBR4-205ENST00000417040 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 DAAM1Q9Y4D1 1078 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 GFPT2O94808 682 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 PDHA1P08559 390 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 CFAP36Q96G28 342 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.13□□□□□ -0.31
UBR4-205ENST00000417040 PCIF1Q9H4Z3 704 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 BCAP29Q9UHQ4 241 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 EIF3CLB5ME19 914 aaKnown RBP13.13□□□□□ -0.31
UBR4-205ENST00000417040 CYP21A2P08686 494 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 METTL13Q8N6R0 699 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 EIF3CQ99613 913 aaKnown RBP13.13□□□□□ -0.31
UBR4-205ENST00000417040 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
UBR4-205ENST00000417040 BIVM-ERCC5R4GMW8 1640 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 H0Y3Z8 333 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 TMOD1P28289 359 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 APBA1Q02410 837 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 KMT5BQ4FZB7 885 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 MCTP2Q6DN12 878 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 RAPH1Q70E73 1250 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 TRIM50Q86XT4 487 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 HIPK4Q8NE63 616 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 YIPF3Q9GZM5 350 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 MEIS1O00470 390 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 PDE6AP16499 860 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 ECE1P42892 770 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 YARSP54577 528 aaKnown RBP13.12□□□□□ -0.31
UBR4-205ENST00000417040 CTSWP56202 376 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 TMTC3Q6ZXV5 915 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 ZNF496Q96IT1 587 aaPredicted RBP13.12□□□□□ -0.31
UBR4-205ENST00000417040 C19orf44Q9H6X5 657 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 ANKFY1Q9P2R3 1169 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 KIF24Q5T7B8 1368 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 MAP3K7O43318 606 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 APOEP02649 317 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 INHBAP08476 426 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 LIG4P49917 911 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 ANAPC5Q9UJX4 755 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 CASP1P29466 404 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 MSH2P43246 934 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 MCUQ8NE86 351 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 HVCN1Q96D96 273 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 SCOCQ9UIL1 159 aa13.12□□□□□ -0.31
UBR4-205ENST00000417040 KDM5AP29375 1690 aaKnown RBP13.11□□□□□ -0.31
UBR4-205ENST00000417040 A0A1W2PQ27 194 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 A0A1W2PQ64 194 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 A0A1W2PQD8 194 aa13.11□□□□□ -0.31
UBR4-205ENST00000417040 FMNL1O95466 1100 aaPredicted RBP13.11□□□□□ -0.31
UBR4-205ENST00000417040 SLC12A1Q13621 1099 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms