RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 M0R2C6 588 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 IQCF3P0C7M6 154 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 POU3F3P20264 500 aaPredicted RBP11.14□□□□□ -0.63
LINC01238-201ENST00000416204 SSTR3P32745 418 aaPredicted RBP11.14□□□□□ -0.63
LINC01238-201ENST00000416204 SLC1A4P43007 532 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 STAT2P52630 851 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 SBK1Q52WX2 424 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 GMCL1P1Q8NEA9 526 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 OR6J1Q8NGC5 347 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 MKL1Q969V6 931 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 SLC9A7Q96T83 725 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 INCENPQ9NQS7 918 aa11.14□□□□□ -0.63
LINC01238-201ENST00000416204 COL4A4P53420 1690 aaPredicted RBP11.14□□□□□ -0.63
LINC01238-201ENST00000416204 MYH4Q9Y623 1939 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 KIF28PB7ZC32 967 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 PI4K2BG5E9Z4 385 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 NMT2O60551 498 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 PFKMP08237 780 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 SUPT20HL2P0C7V6 817 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 TSPY3P0CV98 308 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 TSPY8P0CW00 308 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 KCNA5P22460 613 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 DEFB103AP81534 67 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 TFAP4Q01664 338 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 BAATQ14032 418 aaPredicted RBP11.13□□□□□ -0.63
LINC01238-201ENST00000416204 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 DUSP28Q4G0W2 176 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 ZSCAN25Q6NSZ9 544 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 STAG1Q8WVM7 1258 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 ANKS1AQ92625 1134 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 MTG1Q9BT17 334 aaPredicted RBP11.13□□□□□ -0.63
LINC01238-201ENST00000416204 ZBED2Q9BTP6 218 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
LINC01238-201ENST00000416204 CCPG1Q9ULG6 757 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 PRR12Q9ULL5 1215 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
LINC01238-201ENST00000416204 PTPDC1A2A3K4 754 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 NFIBO00712 420 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 GPAA1O43292 621 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 IL9P15248 144 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 SLC16A2P36021 539 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 KCNJ6P48051 423 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 MRE11P49959 708 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 WDR5P61964 334 aaKnown RBP11.12□□□□□ -0.63
LINC01238-201ENST00000416204 CCDC96Q2M329 555 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 TTBK2Q6IQ55 1244 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 SLC30A10Q6XR72 485 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 GJD3Q8N144 294 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 CHURC1Q8WUH1 139 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 SEC62Q99442 399 aaKnown RBP11.12□□□□□ -0.63
LINC01238-201ENST00000416204 UBE2ZQ9H832 354 aaPredicted RBP11.12□□□□□ -0.63
LINC01238-201ENST00000416204 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
LINC01238-201ENST00000416204 ARIH1Q9Y4X5 557 aaPredicted RBP11.12□□□□□ -0.63
LINC01238-201ENST00000416204 RAB11FIP3O75154 756 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 CALML3P27482 149 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 CPT1AP50416 773 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 ALDH5A1P51649 535 aaPredicted RBP11.11□□□□□ -0.63
LINC01238-201ENST00000416204 TKFCQ3LXA3 575 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 FAM160B2Q86V87 743 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 RPAP2Q8IXW5 612 aaPredicted RBP11.11□□□□□ -0.63
LINC01238-201ENST00000416204 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
LINC01238-201ENST00000416204 PHOSPHO2Q8TCD6 241 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 GMCL1Q96IK5 515 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 SUGCTQ9HAC7 445 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 Q9Y3F1 56 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 TRIOO75962 3097 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 C5orf42Q9H799 3197 aa11.11□□□□□ -0.63
LINC01238-201ENST00000416204 FRMPD2Q68DX3 1309 aaPredicted RBP11.1□□□□□ -0.63
LINC01238-201ENST00000416204 LCTP09848 1927 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 H3BQ06 376 aaPredicted RBP11.1□□□□□ -0.63
LINC01238-201ENST00000416204 RNF113AO15541 343 aaKnown RBP11.1□□□□□ -0.63
LINC01238-201ENST00000416204 HMMRO75330 724 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 RFC2P35250 354 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 GPNMBQ14956 572 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 PTGISQ16647 500 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 EP400NLQ6ZTU2 488 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 FAM178BQ8IXR5 827 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 IFNL3Q8IZI9 196 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 APPBP2Q92624 585 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 SEZ6LQ9BYH1 1024 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 BRWD1Q9NSI6 2320 aa11.1□□□□□ -0.63
LINC01238-201ENST00000416204 MYH7P12883 1935 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 TET1Q8NFU7 2136 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 PRR33A8MZF0 331 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 ARIH2O95376 493 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 PDE4DQ08499 809 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 BFSP2Q13515 415 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 PPP2R5BQ15173 497 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 CSPP1Q1MSJ5 1256 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 PTCRAQ6ISU1 281 aaPredicted RBP11.09□□□□□ -0.63
LINC01238-201ENST00000416204 RCSD1Q6JBY9 416 aa11.09□□□□□ -0.63
LINC01238-201ENST00000416204 GDF6Q6KF10 455 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms