RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 KIAA1524Q8TCG1 905 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 MRRFQ96E11 262 aaKnown RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 FBXO40Q9UH90 709 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 TAF1CQ15572 869 aaPredicted RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 ZNF365Q70YC5 407 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 NOSTRINQ8IVI9 506 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 RAB3IL1Q8TBN0 382 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 CSRNP2Q9H175 543 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 LRRIQ4A6NIV6 560 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 IRX5P78411 483 aaPredicted RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 PKP1Q13835 747 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 FASTKD5Q7L8L6 764 aaKnown RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 ZNF577Q9BSK1 485 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 NKIRAS1Q9NYS0 192 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 KIAA1468Q9P260 1216 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 RASA3Q14644 834 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 LRCH2Q5VUJ6 765 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 GPR161Q8N6U8 529 aaKnown RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 IWS1Q96ST2 819 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 ZNF215Q9UL58 517 aaPredicted RBP17.2■□□□□ 0.34
PHRF1-203ENST00000416188 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 NRKQ7Z2Y5 1582 aa17.2■□□□□ 0.34
PHRF1-203ENST00000416188 SEPT2Q15019 361 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 TMED8Q6PL24 325 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 ZSWIM6Q9HCJ5 1215 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 CDC37Q16543 378 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 FAM83BQ5T0W9 1011 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 LIN9Q5TKA1 542 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 ZNF589Q86UQ0 364 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 RDH13Q8NBN7 331 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 TMEM106CQ9BVX2 250 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 LIG4P49917 911 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 RETREG2Q8NC44 543 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 RAET1EQ8TD07 263 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 ANO3Q9BYT9 981 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 FAM170AA1A519 330 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 CELF2O95319 508 aaKnown RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 TNNI1P19237 187 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 ADKP55263 362 aaKnown RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 TGFB2P61812 414 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 CYP4A11Q02928 519 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 GPBP1Q86WP2 473 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
PHRF1-203ENST00000416188 UBL4BQ8N7F7 174 aa17.19■□□□□ 0.34
PHRF1-203ENST00000416188 PSMD14O00487 310 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 VIMP08670 466 aaKnown RBP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 EIF2AK2P19525 551 aaKnown RBP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 KLHL7Q8IXQ5 586 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 RPS6KC1Q96S38 1066 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 FAM204AQ9H8W3 233 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 OR52Z1P0C646 297 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 CYP2D6P10635 497 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 TUBB2AQ13885 445 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 TFDP1Q14186 410 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 RSBN1LQ6PCB5 846 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 RRAGAQ7L523 313 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 TSC1Q92574 1164 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 TUBB2BQ9BVA1 445 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 TNPO2O14787 897 aaKnown RBP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 PFKFB2O60825 505 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 GYS1P13807 737 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 SCARF1Q14162 830 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 PPP1R21Q6ZMI0 780 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 PCDHB13Q9Y5F0 798 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 CYP2E1P05181 493 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 CD19P15391 556 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 SETDB1Q15047 1291 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 CCDC14Q49A88 953 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 MIS18BP1Q6P0N0 1132 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 RNF207Q6ZRF8 634 aa17.18■□□□□ 0.34
PHRF1-203ENST00000416188 PROCA1Q8NCQ7 364 aaPredicted RBP17.18■□□□□ 0.34
PHRF1-203ENST00000416188 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 H0YCG3 227 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 ZBTB24O43167 697 aaPredicted RBP17.17■□□□□ 0.34
PHRF1-203ENST00000416188 PSMC4P43686 418 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 SNAP25P60880 206 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 APOL6Q9BWW8 343 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 USTQ9Y2C2 406 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 SUGT1Q9Y2Z0 365 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 CSPG5O95196 566 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 PPARDQ03181 441 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 MYRIPQ8NFW9 859 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 SLC7A3Q8WY07 619 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 MAP4K1Q92918 833 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 CHAMP1Q96JM3 812 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 TRIM7Q9C029 511 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 UTP11Q9Y3A2 253 aaKnown RBP17.17■□□□□ 0.34
PHRF1-203ENST00000416188 E7EVH7 732 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 ZNF827Q17R98 1081 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 MFSD14CQ5VZR4 134 aa17.17■□□□□ 0.34
PHRF1-203ENST00000416188 TYW1BQ6NUM6 668 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms