RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TLE2Q04725 743 aa19.64■□□□□ 0.73
SCAMP4-204ENST00000414057 CUL4AQ13619 759 aa19.64■□□□□ 0.73
SCAMP4-204ENST00000414057 MUM1L1Q5H9M0 696 aa19.64■□□□□ 0.73
SCAMP4-204ENST00000414057 INTS4Q96HW7 963 aaKnown RBP19.64■□□□□ 0.73
SCAMP4-204ENST00000414057 KAT14Q9H8E8 782 aa19.64■□□□□ 0.73
SCAMP4-204ENST00000414057 LOC102724159A0A0B4J2E5 919 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 SOWAHBA6NEL2 793 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 CLTBP09497 229 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 CPA1P15085 419 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 MCM5P33992 734 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 EXOSC10Q01780 885 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 TNFAIP2Q03169 654 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 PWP2Q15269 919 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 KCNA10Q16322 511 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 NOL8Q76FK4 1167 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 LRCH3Q96II8 777 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 ZSCAN10Q96SZ4 725 aaPredicted RBP19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 MPHOSPH6Q99547 160 aaKnown RBP19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 ZKSCAN3Q9BRR0 538 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 PDLIM7Q9NR12 457 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 ELP1O95163 1332 aa19.63■□□□□ 0.73
SCAMP4-204ENST00000414057 DCDC2CA8MYV0 355 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 GNASQ5JWF2 1037 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 MB21D2Q8IYB1 491 aaPredicted RBP19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 PNMA1Q8ND90 353 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 ANKS1AQ92625 1134 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 TOX2Q96NM4 488 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 MTA3Q9BTC8 594 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 AGXT2Q9BYV1 514 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 KATNBL1Q9H079 304 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 UPF3AQ9H1J1 476 aaKnown RBP19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 MROH7Q68CQ1 1323 aa19.62■□□□□ 0.73
SCAMP4-204ENST00000414057 B4E1Z4 1266 aa19.61■□□□□ 0.73
SCAMP4-204ENST00000414057 CCSAPQ6IQ19 270 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-204ENST00000414057 VTI1AQ96AJ9 217 aa19.61■□□□□ 0.73
SCAMP4-204ENST00000414057 UBAC1Q9BSL1 405 aa19.61■□□□□ 0.73
SCAMP4-204ENST00000414057 VTA1Q9NP79 307 aa19.61■□□□□ 0.73
SCAMP4-204ENST00000414057 CIZ1Q9ULV3 898 aaPredicted RBP19.61■□□□□ 0.73
SCAMP4-204ENST00000414057 PTPDC1A2A3K4 754 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 PQBP1O60828 265 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 ASGR1P07306 291 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 NKX3-2P78367 333 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 FGD1P98174 961 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 BAATQ14032 418 aaPredicted RBP19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 TOB2Q14106 344 aaPredicted RBP19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 IQSEC1Q6DN90 963 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 ANKRD33Q7Z3H0 272 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 MAF1Q9H063 256 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 AP5M1Q9H0R1 490 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 ZSWIM5Q9P217 1185 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 SMCHD1A6NHR9 2005 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 B4DLN1 442 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 ZEB2O60315 1214 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 MRPL12P52815 198 aaKnown RBP19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 ASPRV1Q53RT3 343 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 RNF207Q6ZRF8 634 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 Q6ZUG5 572 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 BADQ92934 168 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 TMEM39AQ9NV64 488 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 Q9Y3F1 56 aa19.6■□□□□ 0.73
SCAMP4-204ENST00000414057 A0A0U1RQG5 324 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 KIAA0355O15063 1070 aa19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 ADCY6O43306 1168 aa19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 CABYRO75952 493 aa19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 RAG1P15918 1043 aa19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 MORC4Q8TE76 937 aa19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 SLKQ9H2G2 1235 aaPredicted RBP19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 DNAH12Q6ZR08 3092 aa19.59■□□□□ 0.73
SCAMP4-204ENST00000414057 TNKSO95271 1327 aa19.58■□□□□ 0.73
SCAMP4-204ENST00000414057 TRIM43BA6NCK2 446 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 MYADML2A6NDP7 307 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 NFIBO00712 420 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 PRC1O43663 620 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 GOLGA8HP0CJ92 632 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 CALML3P27482 149 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 DDIT3P35638 169 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 ALDH5A1P51649 535 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 IFIT1BQ5T764 474 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 SH3RF1Q7Z6J0 888 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 TLK2Q86UE8 772 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 ENAHQ8N8S7 591 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 TRIM43Q96BQ3 446 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 TMEM87BQ96K49 555 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 GNEQ9Y223 722 aaKnown RBP19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.58■□□□□ 0.72
SCAMP4-204ENST00000414057 PARP1P09874 1014 aaKnown RBP19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 EEPD1Q7L9B9 569 aa19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 SPRYD3Q8NCJ5 442 aa19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 RGS22Q8NE09 1264 aa19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 DNERQ8NFT8 737 aa19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 SEZ6LQ9BYH1 1024 aa19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 UBA5Q9GZZ9 404 aa19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 TPCN1Q9ULQ1 816 aa19.57■□□□□ 0.72
SCAMP4-204ENST00000414057 ASTN1O14525 1302 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 ARVCFO00192 962 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 TLR3O15455 904 aaKnown RBP19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 EVCP57679 992 aa19.56■□□□□ 0.72
SCAMP4-204ENST00000414057 FAAP100Q0VG06 881 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms