RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 CLIC4Q9Y696 253 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 LAMC1P11047 1609 aa18.99■□□□□ 0.63
PHRF1-202ENST00000413872 IGSF3O75054 1194 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 ERCC3P19447 782 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 KIF11P52732 1056 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 SEPT2Q15019 361 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 SLC10A4Q96EP9 437 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 DHTKD1Q96HY7 919 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-202ENST00000413872 MTA3Q9BTC8 594 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 ISCA1Q9BUE6 129 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 RIC8AQ9NPQ8 531 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 MYO1AQ9UBC5 1043 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 MED10Q9BTT4 135 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 SLC39A2Q9NP94 309 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 SAMD15Q9P1V8 674 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 RFX7Q2KHR2 1363 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 FAM76AQ8TAV0 307 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 PARP2Q9UGN5 583 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 HNRNPDLO14979 420 aaKnown RBP18.98■□□□□ 0.63
PHRF1-202ENST00000413872 MCAMP43121 646 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 PDZD4Q76G19 769 aaPredicted RBP18.98■□□□□ 0.63
PHRF1-202ENST00000413872 CD209Q9NNX6 404 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 C1orf167Q5SNV9 1468 aa18.98■□□□□ 0.63
PHRF1-202ENST00000413872 ZBTB24O43167 697 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-202ENST00000413872 CRKP46108 304 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 ITIH3Q06033 890 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 SETDB1Q15047 1291 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 DAAM2Q86T65 1068 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 NBPF11Q86T75 865 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 ARHGEF1Q92888 912 aaKnown RBP18.97■□□□□ 0.63
PHRF1-202ENST00000413872 CLIC6Q96NY7 704 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 A6NNZ2 444 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 TUBB8Q3ZCM7 444 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 TRERF1Q96PN7 1200 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 MMS19Q96T76 1030 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 SH3GLB2Q9NR46 395 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 TLR3O15455 904 aaKnown RBP18.97■□□□□ 0.63
PHRF1-202ENST00000413872 NDUFA8P51970 172 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 KIF23Q02241 960 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-202ENST00000413872 PAK2Q13177 524 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 PI4K2BQ8TCG2 481 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 TMEM206Q9H813 350 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 SLC16A2P36021 539 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 SND1Q7KZF4 910 aaKnown RBP eCLIP18.97■□□□□ 0.63
PHRF1-202ENST00000413872 TBC1D31Q96DN5 1066 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.97■□□□□ 0.638e-7■■■□□ 17.4
PHRF1-202ENST00000413872 ZNF215Q9UL58 517 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-202ENST00000413872 DTNBO60941 627 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 CDC37Q16543 378 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-202ENST00000413872 CCDC105Q8IYK2 499 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 STAG1Q8WVM7 1258 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 ACCSQ96QU6 501 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 FBXO40Q9UH90 709 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 FAM184BQ9ULE4 1060 aa18.97■□□□□ 0.63
PHRF1-202ENST00000413872 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 CUL4AQ13619 759 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 CCDC6Q16204 474 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 TXNRD1Q16881 649 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 RUFY4Q6ZNE9 571 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 DYNLL2Q96FJ2 89 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 BZW2Q9Y6E2 419 aaKnown RBP18.96■□□□□ 0.63
PHRF1-202ENST00000413872 ARHGEF37A1IGU5 675 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 GOLGA6CA6NDK9 693 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 GOLGA6BA6NDN3 693 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 GOLGA6DP0CG33 693 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 IGBP1P78318 339 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 UAP1Q16222 522 aaPredicted RBP18.96■□□□□ 0.63
PHRF1-202ENST00000413872 PPP1R2P3Q6NXS1 205 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 CCT6BQ92526 530 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 RAB17Q9H0T7 212 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 GOLGA6AQ9NYA3 693 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 CAPN9O14815 690 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 DLATP10515 647 aaKnown RBP18.96■□□□□ 0.63
PHRF1-202ENST00000413872 AP3B2Q13367 1082 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
PHRF1-202ENST00000413872 VPS72Q15906 364 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 HAUS1Q96CS2 278 aa18.96■□□□□ 0.63
PHRF1-202ENST00000413872 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
PHRF1-202ENST00000413872 MTMR3Q13615 1198 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 TBC1D9BQ66K14 1250 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 USP17L2Q6R6M4 530 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 CCDC89Q8N998 374 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 PSDA5PKW4 1024 aaPredicted RBP18.95■□□□□ 0.62
PHRF1-202ENST00000413872 LACTBP83111 547 aaPredicted RBP18.95■□□□□ 0.62
PHRF1-202ENST00000413872 CCDC127Q96BQ5 260 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 MRFAP1L1Q96HT8 127 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 RAB20Q9NX57 234 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 RFX1P22670 979 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 EEF1GP26641 437 aaKnown RBP18.95■□□□□ 0.62
PHRF1-202ENST00000413872 KMT5BQ4FZB7 885 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 SEPT14Q6ZU15 432 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 CCDC121Q6ZUS5 278 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 PPM1KQ8N3J5 372 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 EBAG9O00559 213 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 STAM2O75886 525 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 CAPN2P17655 700 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 RCAN1P53805 252 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 EXOC3L4Q17RC7 722 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 SIRT2Q8IXJ6 389 aa18.95■□□□□ 0.62
PHRF1-202ENST00000413872 ABI1Q8IZP0 508 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms