RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FSD1Q9BTV5 496 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 CCPG1Q9ULG6 757 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 ISY1Q9ULR0 285 aaKnown RBP14.4□□□□□ -0.1
LIMS2-210ENST00000413578 PCDHA11Q9Y5I1 949 aa14.4□□□□□ -0.1
LIMS2-210ENST00000413578 XIRP2A4UGR9 3374 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 LCTP09848 1927 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 NFIBO00712 420 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 MYOGP15173 224 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 ALDH5A1P51649 535 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-210ENST00000413578 BAATQ14032 418 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-210ENST00000413578 VPS53Q5VIR6 699 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 TTBK2Q6IQ55 1244 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 KIAA1211Q6ZU35 1233 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 RPUSD2Q8IZ73 545 aaKnown RBP14.39□□□□□ -0.11
LIMS2-210ENST00000413578 TRMT13Q9NUP7 481 aaKnown RBP14.39□□□□□ -0.11
LIMS2-210ENST00000413578 PCDHB15Q9Y5E8 787 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 SLC4A7Q9Y6M7 1214 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 MYO9BQ13459 2157 aa14.39□□□□□ -0.11
LIMS2-210ENST00000413578 PFKMP08237 780 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 CYP2C9P11712 490 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 ATP2A2P16615 1042 aaKnown RBP14.38□□□□□ -0.11
LIMS2-210ENST00000413578 COL9A1P20849 921 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 IGFBP4P22692 258 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 EDNRBP24530 442 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 TTLL4Q14679 1199 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 ALX1Q15699 326 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 CCDC85BQ15834 202 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-210ENST00000413578 PPP2R2DQ66LE6 453 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 CLEC4DQ8WXI8 215 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 UHRF1Q96T88 793 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-210ENST00000413578 WDR11Q9BZH6 1224 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 POLR3EQ9NVU0 708 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 ADD3Q9UEY8 706 aaKnown RBP14.38□□□□□ -0.11
LIMS2-210ENST00000413578 TNKSO95271 1327 aa14.38□□□□□ -0.11
LIMS2-210ENST00000413578 SUPT20HL2P0C7V6 817 aa14.37□□□□□ -0.11
LIMS2-210ENST00000413578 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
LIMS2-210ENST00000413578 MX1P20591 662 aa14.37□□□□□ -0.11
LIMS2-210ENST00000413578 SLC16A2P36021 539 aa14.37□□□□□ -0.11
LIMS2-210ENST00000413578 SYDE2Q5VT97 1194 aa14.37□□□□□ -0.11
LIMS2-210ENST00000413578 SLC30A10Q6XR72 485 aa14.37□□□□□ -0.11
LIMS2-210ENST00000413578 TCP11L1Q9NUJ3 509 aa14.37□□□□□ -0.11
LIMS2-210ENST00000413578 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
LIMS2-210ENST00000413578 SNHG28P0DPA3 235 aa14.36□□□□□ -0.11
LIMS2-210ENST00000413578 BMP1P13497 986 aa14.36□□□□□ -0.11
LIMS2-210ENST00000413578 CPT1AP50416 773 aa14.36□□□□□ -0.11
LIMS2-210ENST00000413578 CCDC96Q2M329 555 aa14.36□□□□□ -0.11
LIMS2-210ENST00000413578 TMEM47Q9BQJ4 181 aa14.36□□□□□ -0.11
LIMS2-210ENST00000413578 WDR19Q8NEZ3 1342 aa14.36□□□□□ -0.11
LIMS2-210ENST00000413578 EPOPA6NHQ4 379 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 A6NJR5 290 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 ZBBXA8MT70 800 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 NKRFO15226 690 aaKnown RBP eCLIP14.35□□□□□ -0.11
LIMS2-210ENST00000413578 PDHBP11177 359 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 TOP1P11387 765 aaKnown RBP14.35□□□□□ -0.11
LIMS2-210ENST00000413578 RFC2P35250 354 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 NBPF20Q3BBV1 942 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 MTG1Q9BT17 334 aaPredicted RBP14.35□□□□□ -0.11
LIMS2-210ENST00000413578 MTMR7Q9Y216 660 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 MTCH2Q9Y6C9 303 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 ZMYM6O95789 1325 aa14.35□□□□□ -0.11
LIMS2-210ENST00000413578 SCN10AQ9Y5Y9 1956 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 PTPDC1A2A3K4 754 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 ARHGEF15O94989 841 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 FGAP02671 866 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 CA3P07451 260 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 MYL3P08590 195 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 RPS6P62753 249 aaKnown RBP14.34□□□□□ -0.11
LIMS2-210ENST00000413578 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 NFRKBQ6P4R8 1299 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 DNERQ8NFT8 737 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 OR6J1Q8NGC5 347 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 PHOSPHO2Q8TCD6 241 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 CTAGE1Q96RT6 745 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 HELLSQ9NRZ9 838 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 RAPGEFL1Q9UHV5 662 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 FRMPD2Q68DX3 1309 aaPredicted RBP14.34□□□□□ -0.11
LIMS2-210ENST00000413578 TRANK1O15050 2925 aa14.34□□□□□ -0.11
LIMS2-210ENST00000413578 IQCF3P0C7M6 154 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 TFF2Q03403 129 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 PTPN11Q06124 597 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-210ENST00000413578 ZNF543Q08ER8 600 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 PPP2R5BQ15173 497 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 RNF207Q6ZRF8 634 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 DEFB128Q7Z7B8 93 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 SCFD2Q8WU76 684 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 COPS5Q92905 334 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 EVI5LQ96CN4 794 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 NECAB3Q96P71 396 aaPredicted RBP14.33□□□□□ -0.12
LIMS2-210ENST00000413578 SLC9A7Q96T83 725 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 GPCPD1Q9NPB8 672 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 PNMA2Q9UL42 364 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 GBF1Q92538 1859 aa14.33□□□□□ -0.12
LIMS2-210ENST00000413578 REV3LO60673 3130 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 PRRC2BQ5JSZ5 2229 aaKnown RBP14.32□□□□□ -0.12
LIMS2-210ENST00000413578 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 RFXAPO00287 272 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 KPNA6O60684 536 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 ARIH2O95376 493 aa14.32□□□□□ -0.12
LIMS2-210ENST00000413578 CALML3P27482 149 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms