RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 MRPL12P52815 198 aaKnown RBP13.32□□□□□ -0.28
HDAC9-206ENST00000413380 NLRP5P59047 1200 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 SAFBQ15424 915 aaKnown RBP eCLIP13.32□□□□□ -0.28
HDAC9-206ENST00000413380 USH1GQ495M9 461 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 IFFO2Q5TF58 517 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 MCTP2Q6DN12 878 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
HDAC9-206ENST00000413380 BLIDQ8IZY5 108 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 CPXCR1Q8N123 301 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 GPRC5AQ8NFJ5 357 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 MOV10L1Q9BXT6 1211 aaKnown RBP13.32□□□□□ -0.28
HDAC9-206ENST00000413380 TSPYL2Q9H2G4 693 aaPredicted RBP13.32□□□□□ -0.28
HDAC9-206ENST00000413380 PSTPIP2Q9H939 334 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 RNF146Q9NTX7 359 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 FBXO40Q9UH90 709 aa13.32□□□□□ -0.28
HDAC9-206ENST00000413380 LRRC37A2A6NM11 1700 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 VPS37CA5D8V6 355 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-206ENST00000413380 ALAS1P13196 640 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-206ENST00000413380 KRT2P35908 639 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 ADCY7P51828 1080 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 HTRA3P83110 453 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 GUCY1B3Q02153 619 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 RESTQ13127 1097 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 CRHR2Q13324 411 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 AP3B2Q13367 1082 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 Q3C1V9 767 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 MUM1L1Q5H9M0 696 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 BRAPQ7Z569 592 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 TRERF1Q96PN7 1200 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 ZSCAN16Q9H4T2 348 aaPredicted RBP13.31□□□□□ -0.28
HDAC9-206ENST00000413380 MROH8Q9H579 483 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 ACAD9Q9H845 621 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 BRMS1Q9HCU9 246 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
HDAC9-206ENST00000413380 BTBD18B2RXH4 712 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 NFIBO00712 420 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 ADAMTS3O15072 1205 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 F13A1P00488 732 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 CCNA1P78396 465 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
HDAC9-206ENST00000413380 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
HDAC9-206ENST00000413380 OXER1Q8TDS5 423 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 SAGE1Q9NXZ1 904 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 PCDHA6Q9UN73 950 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 PCDHA8Q9Y5H6 950 aa13.3□□□□□ -0.28
HDAC9-206ENST00000413380 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-206ENST00000413380 FOSP01100 380 aaPredicted RBP13.29□□□□□ -0.28
HDAC9-206ENST00000413380 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 ERCC3P19447 782 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 GRM1Q13255 1194 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 NR5A1Q13285 461 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 NOM1Q5C9Z4 860 aaKnown RBP13.29□□□□□ -0.28
HDAC9-206ENST00000413380 ABRAQ8N0Z2 381 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 ANKRD13CQ8N6S4 541 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 CRYGNQ8WXF5 182 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 PORCNQ9H237 461 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 A1CFQ9NQ94 594 aaKnown RBP13.29□□□□□ -0.28
HDAC9-206ENST00000413380 PFASO15067 1338 aa13.29□□□□□ -0.28
HDAC9-206ENST00000413380 PEX10O60683 326 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 MAPK4P31152 587 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 FOSBP53539 338 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 RPS6P62753 249 aaKnown RBP13.28□□□□□ -0.28
HDAC9-206ENST00000413380 PLS1Q14651 629 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 KRT25Q7Z3Z0 450 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 DNAJC5GQ8N7S2 189 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 CYP39A1Q9NYL5 469 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 KIAA1217Q5T5P2 1943 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 MCM3APO60318 1980 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
HDAC9-206ENST00000413380 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
HDAC9-206ENST00000413380 DNAJC25-GNG10A0A024R161 153 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 STRNO43815 780 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 SREBF1P36956 1147 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 TRAPPC10P48553 1259 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 CLCN6P51797 869 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 UBE2SQ16763 222 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 MYSM1Q5VVJ2 828 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 RNF207Q6ZRF8 634 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 CLEC17AQ6ZS10 378 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 NCAPG2Q86XI2 1143 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 SYTL5Q8TDW5 730 aaPredicted RBP13.27□□□□□ -0.29
HDAC9-206ENST00000413380 TBC1D5Q92609 795 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 R3HDMLQ9H3Y0 253 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 RNF186Q9NXI6 227 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 COL20A1Q9P218 1284 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
HDAC9-206ENST00000413380 LOC102724159A0A0B4J2E5 919 aa13.26□□□□□ -0.29
HDAC9-206ENST00000413380 CFBP00751 764 aa13.26□□□□□ -0.29
HDAC9-206ENST00000413380 GRB14Q14449 540 aa13.26□□□□□ -0.29
HDAC9-206ENST00000413380 PWP2Q15269 919 aaKnown RBP13.26□□□□□ -0.29
HDAC9-206ENST00000413380 EARS2Q5JPH6 523 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms