RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 IBTKQ9P2D0 1353 aaPredicted RBP6.76□□□□□ -1.33
LINC00342-201ENST00000412393 UBN2Q6ZU65 1347 aa6.76□□□□□ -1.33
LINC00342-201ENST00000412393 ABCC12Q96J65 1359 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 METTL12A8MUP2 240 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 ALDH1B1P30837 517 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 OXCT1P55809 520 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 GNAI1P63096 354 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 CALD1Q05682 793 aaKnown RBP6.75□□□□□ -1.33
LINC00342-201ENST00000412393 AIMP1Q12904 312 aaKnown RBP6.75□□□□□ -1.33
LINC00342-201ENST00000412393 PDE3AQ14432 1141 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 PARP10Q53GL7 1025 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 CCDC93Q567U6 631 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 HSP90AB3PQ58FF7 597 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 SUSD4Q5VX71 490 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 COPS6Q7L5N1 327 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 C16orf71Q8IYS4 520 aaPredicted RBP6.75□□□□□ -1.33
LINC00342-201ENST00000412393 XAGE3Q8WTP9 111 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 TNKS2Q9H2K2 1166 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 TAOK3Q9H2K8 898 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 ZFYVE28Q9HCC9 887 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 LATS2Q9NRM7 1088 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 CRIM1Q9NZV1 1036 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 POLIQ9UNA4 740 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 RIC1Q4ADV7 1423 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 CACNA1FO60840 1977 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 TAF1P21675 1872 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 LTBP3Q9NS15 1303 aa6.75□□□□□ -1.33
LINC00342-201ENST00000412393 GLTPD2A6NH11 291 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 TMPRSS2O15393 492 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 NTSR2O95665 410 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 HOXB7P09629 217 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 HSPA6P17066 643 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 CDK5R2Q13319 367 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 PPP1R42Q7Z4L9 355 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 SMYD4Q8IYR2 804 aaPredicted RBP6.74□□□□□ -1.33
LINC00342-201ENST00000412393 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
LINC00342-201ENST00000412393 IFT57Q9NWB7 429 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 CHPF2Q9P2E5 772 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 FOXD3Q9UJU5 478 aaPredicted RBP6.74□□□□□ -1.33
LINC00342-201ENST00000412393 PPP1R9AQ9ULJ8 1098 aa6.74□□□□□ -1.33
LINC00342-201ENST00000412393 DDX60Q8IY21 1712 aaKnown RBP6.73□□□□□ -1.33
LINC00342-201ENST00000412393 WDR90Q96KV7 1748 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 ZNF853P0CG23 659 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 VEGFAP15692 232 aaPredicted RBP6.73□□□□□ -1.33
LINC00342-201ENST00000412393 NPR3P17342 541 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 MPSTP25325 297 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 GRIA4P48058 902 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 PTPN12Q05209 780 aaKnown RBP6.73□□□□□ -1.33
LINC00342-201ENST00000412393 TCIRG1Q13488 830 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 CRY2Q49AN0 593 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 OLFM4Q6UX06 510 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 NLRP10Q86W26 655 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 RTKN2Q8IZC4 609 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 TCF12Q99081 682 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 UTP14AQ9BVJ6 771 aaKnown RBP6.73□□□□□ -1.33
LINC00342-201ENST00000412393 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 MRS2Q9HD23 443 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 HYPKQ9NX55 129 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 DBF4Q9UBU7 674 aaPredicted RBP6.73□□□□□ -1.33
LINC00342-201ENST00000412393 SCN4AP35499 1836 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 ZBED9Q6R2W3 1325 aa6.73□□□□□ -1.33
LINC00342-201ENST00000412393 ELL2O00472 640 aaPredicted RBP6.72□□□□□ -1.33
LINC00342-201ENST00000412393 NFIBO00712 420 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 GLI1P08151 1106 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 ITPKAP23677 461 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 ID3Q02535 119 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 FKBP4Q02790 459 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00342-201ENST00000412393 SLC10A5Q5PT55 438 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 SYDE1Q6ZW31 735 aaPredicted RBP6.72□□□□□ -1.33
LINC00342-201ENST00000412393 GALNT12Q8IXK2 581 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 PLBD2Q8NHP8 589 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 RBM17Q96I25 401 aaKnown RBP6.72□□□□□ -1.33
LINC00342-201ENST00000412393 CRAMP1Q96RY5 1269 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 DUSP23Q9BVJ7 150 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 ZNF277Q9NRM2 450 aaPredicted RBP6.72□□□□□ -1.33
LINC00342-201ENST00000412393 LMCD1Q9NZU5 365 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 TRMT112Q9UI30 125 aaKnown RBP6.72□□□□□ -1.33
LINC00342-201ENST00000412393 PCOLCE2Q9UKZ9 415 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 CTNND2Q9UQB3 1225 aa6.72□□□□□ -1.33
LINC00342-201ENST00000412393 A0A1W2PP55 124 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 TCERG1O14776 1098 aaKnown RBP6.71□□□□□ -1.34
LINC00342-201ENST00000412393 DDNO94850 711 aaPredicted RBP6.71□□□□□ -1.34
LINC00342-201ENST00000412393 FAM13AO94988 1023 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 DEKP35659 375 aaKnown RBP6.71□□□□□ -1.34
LINC00342-201ENST00000412393 CD96P40200 585 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 FSTL1Q12841 308 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 CCDC27Q2M243 656 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 SYNE4Q8N205 404 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 C8orf58Q8NAV2 365 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 FANCD2OSQ96PS1 177 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 CHMP4AQ9BY43 222 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 ZNF576Q9H609 170 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 KRT82Q9NSB4 513 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 MYH3P11055 1940 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 SH3TC1Q8TE82 1336 aa6.71□□□□□ -1.34
LINC00342-201ENST00000412393 SNED1Q8TER0 1413 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 ECEL1O95672 775 aa6.7□□□□□ -1.34
LINC00342-201ENST00000412393 HCLS1P14317 486 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms