RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SPTBN5Q9NRC6 3674 aaKnown RBP19.72■□□□□ 0.75
MRPL55-220ENST00000411464 POLR3EQ9NVU0 708 aa19.72■□□□□ 0.75
MRPL55-220ENST00000411464 YBX2Q9Y2T7 364 aaKnown RBP19.72■□□□□ 0.75
MRPL55-220ENST00000411464 MYH4Q9Y623 1939 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 LOC102724159A0A0B4J2E5 919 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 PTPDC1A2A3K4 754 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 ZBBXA8MT70 800 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 CPT1AP50416 773 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 ALDH5A1P51649 535 aaPredicted RBP19.71■□□□□ 0.75
MRPL55-220ENST00000411464 MRPS5P82675 430 aaKnown RBP19.71■□□□□ 0.75
MRPL55-220ENST00000411464 PWP2Q15269 919 aaKnown RBP19.71■□□□□ 0.75
MRPL55-220ENST00000411464 VPS53Q5VIR6 699 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 EVI5LQ96CN4 794 aa19.71■□□□□ 0.75
MRPL55-220ENST00000411464 TTC28Q96AY4 2481 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 CHD9Q3L8U1 2897 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 NFIBO00712 420 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 TOP1P11387 765 aaKnown RBP19.7■□□□□ 0.74
MRPL55-220ENST00000411464 RABGGTBP53611 331 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 ALX1Q15699 326 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 BRDTQ58F21 947 aaPredicted RBP19.7■□□□□ 0.74
MRPL55-220ENST00000411464 RRP12Q5JTH9 1297 aaKnown RBP19.7■□□□□ 0.74
MRPL55-220ENST00000411464 IL27Q8NEV9 243 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 SCLYQ96I15 445 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 MPHOSPH6Q99547 160 aaKnown RBP19.7■□□□□ 0.74
MRPL55-220ENST00000411464 TSPYL2Q9H2G4 693 aaPredicted RBP19.7■□□□□ 0.74
MRPL55-220ENST00000411464 GPCPD1Q9NPB8 672 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 TRMT13Q9NUP7 481 aaKnown RBP19.7■□□□□ 0.74
MRPL55-220ENST00000411464 PNMA2Q9UL42 364 aa19.7■□□□□ 0.74
MRPL55-220ENST00000411464 PFKMP08237 780 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 MYL3P08590 195 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 FGRP09769 529 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 CYP2C9P11712 490 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 ATP2A2P16615 1042 aaKnown RBP19.69■□□□□ 0.74
MRPL55-220ENST00000411464 CALML3P27482 149 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 PURAQ00577 322 aaKnown RBP19.69■□□□□ 0.74
MRPL55-220ENST00000411464 PPP2R2DQ66LE6 453 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 TMEM47Q9BQJ4 181 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 HELLSQ9NRZ9 838 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 PCDHA11Q9Y5I1 949 aa19.69■□□□□ 0.74
MRPL55-220ENST00000411464 FRMPD2Q68DX3 1309 aaPredicted RBP19.69■□□□□ 0.74
MRPL55-220ENST00000411464 PDE4DQ08499 809 aa19.68■□□□□ 0.74
MRPL55-220ENST00000411464 RNF207Q6ZRF8 634 aa19.68■□□□□ 0.74
MRPL55-220ENST00000411464 OR6J1Q8NGC5 347 aa19.68■□□□□ 0.74
MRPL55-220ENST00000411464 MTG1Q9BT17 334 aaPredicted RBP19.68■□□□□ 0.74
MRPL55-220ENST00000411464 TCP11L1Q9NUJ3 509 aa19.68■□□□□ 0.74
MRPL55-220ENST00000411464 TNKSO95271 1327 aa19.68■□□□□ 0.74
MRPL55-220ENST00000411464 RAD50Q92878 1312 aa19.68■□□□□ 0.74
MRPL55-220ENST00000411464 MCM3APO60318 1980 aa19.67■□□□□ 0.74
MRPL55-220ENST00000411464 RBM47A0AV96 593 aaKnown RBP19.67■□□□□ 0.74
MRPL55-220ENST00000411464 FGAP02671 866 aa19.67■□□□□ 0.74
MRPL55-220ENST00000411464 MYOGP15173 224 aa19.67■□□□□ 0.74
MRPL55-220ENST00000411464 FAM47CQ5HY64 1035 aa19.67■□□□□ 0.74
MRPL55-220ENST00000411464 ANKRD45Q5TZF3 282 aa19.67■□□□□ 0.74
MRPL55-220ENST00000411464 DEFB128Q7Z7B8 93 aa19.67■□□□□ 0.74
MRPL55-220ENST00000411464 ADAMTS19Q8TE59 1207 aa19.67■□□□□ 0.74
MRPL55-220ENST00000411464 B4DLN1 442 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 NKRFO15226 690 aaKnown RBP eCLIP19.66■□□□□ 0.74
MRPL55-220ENST00000411464 KPNA6O60684 536 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 ACTN1P12814 892 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 MRPL12P52815 198 aaKnown RBP19.66■□□□□ 0.74
MRPL55-220ENST00000411464 TTLL4Q14679 1199 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 PPP2R5BQ15173 497 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 MCMDC2Q4G0Z9 681 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 TMEM67Q5HYA8 995 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 SLC30A10Q6XR72 485 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 RETREG2Q8NC44 543 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 SCFD2Q8WU76 684 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 CLEC4DQ8WXI8 215 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 VWCEQ96DN2 955 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 TTC14Q96N46 770 aa19.66■□□□□ 0.74
MRPL55-220ENST00000411464 PDHBP11177 359 aa19.65■□□□□ 0.74
MRPL55-220ENST00000411464 RPS6P62753 249 aaKnown RBP19.65■□□□□ 0.74
MRPL55-220ENST00000411464 NBPF20Q3BBV1 942 aa19.65■□□□□ 0.74
MRPL55-220ENST00000411464 MICALL1Q8N3F8 863 aa19.65■□□□□ 0.74
MRPL55-220ENST00000411464 SALL3Q9BXA9 1300 aa19.65■□□□□ 0.74
MRPL55-220ENST00000411464 RFC2P35250 354 aa19.64■□□□□ 0.73
MRPL55-220ENST00000411464 NFRKBQ6P4R8 1299 aa19.64■□□□□ 0.73
MRPL55-220ENST00000411464 MFSD6Q6ZSS7 791 aa19.64■□□□□ 0.73
MRPL55-220ENST00000411464 DNERQ8NFT8 737 aa19.64■□□□□ 0.73
MRPL55-220ENST00000411464 FAM227BQ96M60 508 aa19.64■□□□□ 0.73
MRPL55-220ENST00000411464 UHRF1Q96T88 793 aaPredicted RBP19.64■□□□□ 0.73
MRPL55-220ENST00000411464 A6NJR5 290 aa19.63■□□□□ 0.73
MRPL55-220ENST00000411464 TXNP10599 105 aaKnown RBP19.63■□□□□ 0.73
MRPL55-220ENST00000411464 HSPD1P10809 573 aaKnown RBP19.63■□□□□ 0.73
MRPL55-220ENST00000411464 COL9A1P20849 921 aa19.63■□□□□ 0.73
MRPL55-220ENST00000411464 PDE1AP54750 535 aa19.63■□□□□ 0.73
MRPL55-220ENST00000411464 HAND2P61296 217 aa19.63■□□□□ 0.73
MRPL55-220ENST00000411464 ZNF543Q08ER8 600 aa19.63■□□□□ 0.73
MRPL55-220ENST00000411464 TICAM2Q86XR7 235 aa19.63■□□□□ 0.73
MRPL55-220ENST00000411464 FTOQ9C0B1 505 aaKnown RBP eCLIP19.63■□□□□ 0.73
MRPL55-220ENST00000411464 NOD1Q9Y239 953 aa19.63■□□□□ 0.73
MRPL55-220ENST00000411464 CHD7Q9P2D1 2997 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 WDR19Q8NEZ3 1342 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 A0A0D9SFI3 127 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 PITPNM1O00562 1244 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 GTPBP6O43824 516 aaPredicted RBP19.62■□□□□ 0.73
MRPL55-220ENST00000411464 CA3P07451 260 aa19.62■□□□□ 0.73
MRPL55-220ENST00000411464 PCP11498 1178 aaKnown RBP19.62■□□□□ 0.73
MRPL55-220ENST00000411464 EDNRBP24530 442 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms