RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 NFIBO00712 420 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 CFBP00751 764 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 DDIT3P35638 169 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 KRT2P35908 639 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 CLK2P49760 499 aaKnown RBP14.13□□□□□ -0.15
LINC00339-201ENST00000404210 HSD17B4P51659 736 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 FOSBP53539 338 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 GUCY1B3Q02153 619 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 SP3Q02447 781 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 NPY5RQ15761 445 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 RNF207Q6ZRF8 634 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 ABRAQ8N0Z2 381 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 BRMS1Q9HCU9 246 aa14.13□□□□□ -0.15
LINC00339-201ENST00000404210 M0R2N6 131 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 GPR25O00155 361 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 FOSP01100 380 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-201ENST00000404210 FCER1AP12319 257 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 BAATQ14032 418 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-201ENST00000404210 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 NSMFQ6X4W1 530 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 PLEKHH3Q7Z736 793 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 ANKRD35Q8N283 1001 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 MMP19Q99542 508 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 FOXP1Q9H334 677 aaPredicted RBP14.12□□□□□ -0.15
LINC00339-201ENST00000404210 CYP39A1Q9NYL5 469 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 PCDHA6Q9UN73 950 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 PCDHA8Q9Y5H6 950 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 PFASO15067 1338 aa14.12□□□□□ -0.15
LINC00339-201ENST00000404210 SLC15A5A6NIM6 579 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 BTBD18B2RXH4 712 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 PTPREP23469 700 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
LINC00339-201ENST00000404210 RPS6P62753 249 aaKnown RBP14.11□□□□□ -0.15
LINC00339-201ENST00000404210 NUCB2P80303 420 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 KCTD2Q14681 263 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 KIF22Q14807 665 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 WDR78Q5VTH9 848 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 DIS3L2Q8IYB7 885 aaKnown RBP14.11□□□□□ -0.15
LINC00339-201ENST00000404210 A1CFQ9NQ94 594 aaKnown RBP14.11□□□□□ -0.15
LINC00339-201ENST00000404210 BIN2Q9UBW5 565 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-201ENST00000404210 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
LINC00339-201ENST00000404210 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 IVNS1ABPQ9Y6Y0 642 aa14.11□□□□□ -0.15
LINC00339-201ENST00000404210 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-201ENST00000404210 ADAMTS3O15072 1205 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 FKTNO75072 461 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 FCGRTP55899 365 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 LACTBP83111 547 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-201ENST00000404210 AP3B2Q13367 1082 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 UBE2SQ16763 222 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 REXO1Q8N1G1 1221 aaKnown RBP14.1□□□□□ -0.15
LINC00339-201ENST00000404210 OXER1Q8TDS5 423 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 SYTL5Q8TDW5 730 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-201ENST00000404210 TNFRSF25Q93038 417 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 ZSCAN16Q9H4T2 348 aaPredicted RBP14.1□□□□□ -0.15
LINC00339-201ENST00000404210 MGAMO43451 1857 aa14.1□□□□□ -0.15
LINC00339-201ENST00000404210 DOCK3Q8IZD9 2030 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 DNAJC25-GNG10A0A024R161 153 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 SPDYE3A6NKU9 549 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 BRD1O95696 1058 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 ZSCAN22P10073 491 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-201ENST00000404210 HOXA13P31271 388 aaPredicted RBP14.09□□□□□ -0.15
LINC00339-201ENST00000404210 PSMC4P43686 418 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 GNL2Q13823 731 aaKnown RBP14.09□□□□□ -0.15
LINC00339-201ENST00000404210 GRB14Q14449 540 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 ARHGEF6Q15052 776 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 MORN1Q5T089 497 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 JAKMIP3Q5VZ66 844 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 KRT25Q7Z3Z0 450 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 FAM133AQ8N9E0 248 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 DNERQ8NFT8 737 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 TAAR1Q96RJ0 339 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 TMEM260Q9NX78 707 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 GJD2Q9UKL4 321 aa14.09□□□□□ -0.15
LINC00339-201ENST00000404210 DIS3Q9Y2L1 958 aaKnown RBP14.09□□□□□ -0.15
LINC00339-201ENST00000404210 LOC102724159A0A0B4J2E5 919 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 CCDC194A0A1B0GVG4 234 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 TNPO2O14787 897 aaKnown RBP14.08□□□□□ -0.16
LINC00339-201ENST00000404210 GNRH1P01148 92 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 CTGFP29279 349 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 NR5A1Q13285 461 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 PWP2Q15269 919 aaKnown RBP14.08□□□□□ -0.16
LINC00339-201ENST00000404210 SLC30A10Q6XR72 485 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 NOSTRINQ8IVI9 506 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 RASGRP4Q8TDF6 673 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 USP6NLQ92738 828 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 NUDT12Q9BQG2 462 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 EHMT1Q9H9B1 1298 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 SLC5A4Q9NY91 659 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 CHMP5Q9NZZ3 219 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 COL20A1Q9P218 1284 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 ZDHHC9Q9Y397 364 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 PLXNB2O15031 1838 aa14.08□□□□□ -0.16
LINC00339-201ENST00000404210 RBBP6Q7Z6E9 1792 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms