RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SLC30A10Q6XR72 485 aa38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 CYP39A1Q9NYL5 469 aa38.22■■■■□ 3.71
CSNK1E-204ENST00000403904 GCOM1H8Y6P7 765 aaPredicted RBP38.21■■■■□ 3.71
CSNK1E-204ENST00000403904 FKTNO75072 461 aa38.21■■■■□ 3.71
CSNK1E-204ENST00000403904 POLR2MP0CAP2 368 aa38.21■■■■□ 3.71
CSNK1E-204ENST00000403904 CAP1Q01518 475 aa38.21■■■■□ 3.71
CSNK1E-204ENST00000403904 PCDHA4Q9UN74 947 aa38.21■■■■□ 3.71
CSNK1E-204ENST00000403904 TNPO2O14787 897 aaKnown RBP38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 STRNO43815 780 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 MMP1P03956 469 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 PDCP20941 246 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 SYT1P21579 422 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 PTPREP23469 700 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 CALML3P27482 149 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 HSD17B4P51659 736 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 KIF22Q14807 665 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 CD99L2Q8TCZ2 262 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 TRIM47Q96LD4 638 aa38.2■■■■□ 3.71
CSNK1E-204ENST00000403904 H3BQV1 296 aa38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 FCGRTP55899 365 aa38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 GHRHRQ02643 423 aa38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 IFFO2Q5TF58 517 aa38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 IPO9Q96P70 1041 aaKnown RBP38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 PFASO15067 1338 aa38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 GLT8D2Q9H1C3 349 aa38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 BIN2Q9UBW5 565 aaPredicted RBP38.19■■■■□ 3.7
CSNK1E-204ENST00000403904 PIK3CDO00329 1044 aa38.18■■■■□ 3.7
CSNK1E-204ENST00000403904 PGK2P07205 417 aa38.18■■■■□ 3.7
CSNK1E-204ENST00000403904 GALNT17Q6IS24 598 aa38.18■■■■□ 3.7
CSNK1E-204ENST00000403904 BLIDQ8IZY5 108 aa38.18■■■■□ 3.7
CSNK1E-204ENST00000403904 ABRAQ8N0Z2 381 aa38.18■■■■□ 3.7
CSNK1E-204ENST00000403904 BICD2Q8TD16 824 aa38.18■■■■□ 3.7
CSNK1E-204ENST00000403904 ADORA2AP29274 412 aa38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 GRB14Q14449 540 aa38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 RASGRP4Q8TDF6 673 aa38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 OXER1Q8TDS5 423 aa38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 SYTL5Q8TDW5 730 aaPredicted RBP38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 PURBQ96QR8 312 aaKnown RBP38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 MAP3K20Q9NYL2 800 aaKnown RBP38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 COL20A1Q9P218 1284 aa38.17■■■■□ 3.7
CSNK1E-204ENST00000403904 FCHSD1Q86WN1 690 aa38.16■■■■□ 3.7
CSNK1E-204ENST00000403904 REXO1Q8N1G1 1221 aaKnown RBP38.16■■■■□ 3.7
CSNK1E-204ENST00000403904 SAMD3Q8N6K7 520 aa38.16■■■■□ 3.7
CSNK1E-204ENST00000403904 DAGLBQ8NCG7 672 aa38.16■■■■□ 3.7
CSNK1E-204ENST00000403904 TMEM260Q9NX78 707 aa38.16■■■■□ 3.7
CSNK1E-204ENST00000403904 SLC15A5A6NIM6 579 aa38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 FOXN1O15353 648 aa38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 HSPA1AP0DMV8 641 aaKnown RBP38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 HSPA1BP0DMV9 641 aaKnown RBP38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 CLK2P49760 499 aaKnown RBP38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 DIS3L2Q8IYB7 885 aaKnown RBP38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 ERO1AQ96HE7 468 aa38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 MAF1Q9H063 256 aa38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 LCTP09848 1927 aa38.15■■■■□ 3.7
CSNK1E-204ENST00000403904 VPS37CA5D8V6 355 aaPredicted RBP38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 KRT2P35908 639 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 SAFBQ15424 915 aaKnown RBP eCLIP38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 JAKMIP3Q5VZ66 844 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 BRMS1Q9HCU9 246 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 BTBD18B2RXH4 712 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 CNTN2Q02246 1040 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 MORN1Q5T089 497 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 PCDHA6Q9UN73 950 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 PCDHA8Q9Y5H6 950 aa38.14■■■■□ 3.7
CSNK1E-204ENST00000403904 DNAJC25-GNG10A0A024R161 153 aa38.13■■■■□ 3.69
CSNK1E-204ENST00000403904 POTEB2H3BUK9 544 aa38.13■■■■□ 3.69
CSNK1E-204ENST00000403904 M0R2N6 131 aa38.13■■■■□ 3.69
CSNK1E-204ENST00000403904 STX6O43752 255 aa38.13■■■■□ 3.69
CSNK1E-204ENST00000403904 NR5A1Q13285 461 aa38.13■■■■□ 3.69
CSNK1E-204ENST00000403904 COBLO75128 1261 aa38.12■■■■□ 3.69
CSNK1E-204ENST00000403904 PGBD1Q96JS3 809 aa38.12■■■■□ 3.69
CSNK1E-204ENST00000403904 TAAR1Q96RJ0 339 aa38.12■■■■□ 3.69
CSNK1E-204ENST00000403904 GJD2Q9UKL4 321 aa38.12■■■■□ 3.69
CSNK1E-204ENST00000403904 ZNF236Q9UL36 1845 aa38.11■■■■□ 3.69
CSNK1E-204ENST00000403904 DPP9Q86TI2 863 aa38.11■■■■□ 3.69
CSNK1E-204ENST00000403904 TEX2Q8IWB9 1127 aa38.11■■■■□ 3.69
CSNK1E-204ENST00000403904 FAM133AQ8N9E0 248 aa38.11■■■■□ 3.69
CSNK1E-204ENST00000403904 NUDT12Q9BQG2 462 aa38.11■■■■□ 3.69
CSNK1E-204ENST00000403904 PLXNA1Q9UIW2 1896 aa38.11■■■■□ 3.69
CSNK1E-204ENST00000403904 HSPA8P11142 646 aaKnown RBP38.1■■■■□ 3.69
CSNK1E-204ENST00000403904 MCTP1Q6DN14 999 aa38.1■■■■□ 3.69
CSNK1E-204ENST00000403904 CASP8AP2Q9UKL3 1982 aa38.1■■■■□ 3.69
CSNK1E-204ENST00000403904 SPDYE3A6NKU9 549 aa38.1■■■■□ 3.69
CSNK1E-204ENST00000403904 MTMR6Q9Y217 621 aa38.1■■■■□ 3.69
CSNK1E-204ENST00000403904 MAP2K5Q13163 448 aa38.09■■■■□ 3.69
CSNK1E-204ENST00000403904 PKP1Q13835 747 aa38.09■■■■□ 3.69
CSNK1E-204ENST00000403904 SOCS4Q8WXH5 440 aa38.09■■■■□ 3.69
CSNK1E-204ENST00000403904 USP6NLQ92738 828 aa38.09■■■■□ 3.69
CSNK1E-204ENST00000403904 GABRQQ9UN88 632 aa38.09■■■■□ 3.69
CSNK1E-204ENST00000403904 AP3B2Q13367 1082 aa38.08■■■■□ 3.69
CSNK1E-204ENST00000403904 RMDN3Q96TC7 470 aa38.08■■■■□ 3.69
CSNK1E-204ENST00000403904 SOWAHBA6NEL2 793 aa38.07■■■■□ 3.69
CSNK1E-204ENST00000403904 KIF28PB7ZC32 967 aa38.07■■■■□ 3.69
CSNK1E-204ENST00000403904 FOSP01100 380 aaPredicted RBP38.07■■■■□ 3.69
CSNK1E-204ENST00000403904 GNL2Q13823 731 aaKnown RBP38.07■■■■□ 3.69
CSNK1E-204ENST00000403904 ZNF792Q3KQV3 632 aa38.07■■■■□ 3.69
CSNK1E-204ENST00000403904 TNFRSF25Q93038 417 aa38.07■■■■□ 3.69
CSNK1E-204ENST00000403904 ANO3Q9BYT9 981 aa38.07■■■■□ 3.69
CSNK1E-204ENST00000403904 FOXP1Q9H334 677 aaPredicted RBP38.07■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms